Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq1420 102 4e-17 >seq1420 Length=85926 Score = 102 bits (112), Expect = 4e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 37931 CCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGTTATAT 37990 || |||||| |||| || ||||| | || | |||||| ||||||| ||| | || Sbjct 4102 CCATGTCATGCATTATTTCAGTTTTACGTTGCTAATGGAGCGTTAAGCTGCCAGCTTTAC 4043 Query 37991 CAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGTTGCTT 38050 || || ||||| || | || |||||||| || ||||||||||| |||||||| || | Sbjct 4042 CAGCGAAGTGCAGACATGTTTTTAGGTGTGCCGTTTAATATTGCCAGCTATGCATTATTA 3983 Query 38051 ACACATATCGTAGCTGCAG-AATGTGGATTAGAAGTTGGTGAATTTGTCTGGACTGGTGG 38109 ||||| || || || ||| || | || |||| ||||| ||| ||||||||||||| Sbjct 3982 ACACACATGGTTGC-ACAGCAAACTAATTTGCAAGTGGGTGACTTTATCTGGACTGGTGG 3924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248750550717409