Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_023590.1 Length=43050 Score E Sequences producing significant alignments: (Bits) Value seq10695 96.9 1e-15 >seq10695 Length=46784 Score = 96.9 bits (106), Expect = 1e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 36945 CCAGTGAACCAACCTTCCATCATGCCAGTAATTAGGATTTTTACAGCCCATTCTTTAATC 37004 || || ||||||||||| ||||||| ||| | |||||| ||||| |||||| || Sbjct 24003 CCTGTAAACCAACCTTCTTTCATGCCGACAATCATGATTTTAACAGCATGTTCTTTTTTC 23944 Query 37005 ATTACGTCGTCGGGATTCTTCGCAAAGTCATGCCCTAGTTTCAAGCCTGCTTTGACATAA 37064 || || |||||||||| | | | |||| || ||||| ||||||| | ||| Sbjct 23943 ATAACTAAATCGGGATTCTGAGTATAATCATAACCCAGTTTGTTTGATGCTTTGTCGTAA 23884 Query 37065 TTATCCAACCATGTAAGTTGAACGTAACCGCGCCCATAATA 37105 ||| || |||| ||||| ||||| ||||| || |||||||| Sbjct 23883 TTAGCCCACCAAGTAAGCTGAACATAACCACGACCATAATA 23843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137606572238312