Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_023693.1
Length=148612
Score E
Sequences producing significant alignments: (Bits) Value
seq1559 129 6e-25
>seq1559
Length=191813
Score = 129 bits (142), Expect = 6e-25
Identities = 201/285 (71%), Gaps = 2/285 (1%)
Strand=Plus/Minus
Query 25496 GGATCGTAATATTCTGTACATTTGTATTCAAAATCAGCAATATCACTA-ATCACAACAAA 25554
|||| |||||| || |||||||| |||||||||||||| |||| | | | || || |
Sbjct 29133 GGATTGTAATAGTCAGTACATTTATATTCAAAATCAGC-ATATTGCGACAATACGACGTA 29075
Query 25555 GCCATGAGCGAAACCAGGAGGAATCCAAAATTGTGTTTTATTCTTTTCAGATAAGAGAAC 25614
||||| || ||||| || |||| ||||| ||||||| |||||| |||||||| |
Sbjct 29074 CCCATGCGCTAAACCTGGCGGAAGCCAAATTTGTGTTCTATTCTCTTCAGATAGCTTTAT 29015
Query 25615 ACCTACCCATTCTCCAAATGTTGGACTACCAACCCTAATATCTACAGCAACATCATAAAC 25674
||| ||||| | ||||| || || | | || | || ||| || || |||||| | ||
Sbjct 29014 GCCTGCCCATGCACCAAAAGTAGGCGAATCTACACGAACATCCACCGCCACATCAAACAC 28955
Query 25675 TTCACCACGAACACAGCGTACCAACTTCCCTTGTGGGTTTTTCTTTTGAAAATGAAGCCC 25734
|| ||||| || || || | || ||||| || || | ||||| |||| | ||
Sbjct 28954 CTCTCCACGTACCACTCGAACTATTTTTCCTTGAGGATTGATGCTTTGATAATGCAAGCC 28895
Query 25735 ACGTAGAACTCCTCGGATAGAACGTGAATGGTTATCTTGGACAAA 25779
| || ||| || | ||| || ||||| ||||| || |||||
Sbjct 28894 TCTTAAAACACCATAAAAAGACCGAGAATGATTATCCTGAACAAA 28850
Score = 114 bits (126), Expect = 1e-20
Identities = 216/316 (68%), Gaps = 4/316 (1%)
Strand=Plus/Minus
Query 27115 GCGTGATCGTCAACGTATAACCAGTCTCTTACTTGAAGACCATTACCATAAACAGGGATT 27174
|| ||||| ||||| || | |||||| | | ||| |||| ||||| || | |||
Sbjct 28022 GCATGATCTTCAACATACAGCCAGTCGCGGATTTGTGATCCATCTCCATAGACTCGAATT 27963
Query 27175 GGTTTATGCATTAAGATATTTGTTATCGTTTTAGGTATTAGTTTTTCTGGATGATGATAT 27234
|| ||| || ||||| || || || || | ||||||||| |||||
Sbjct 27962 GGCTTACCTTCTAGCGCATTTGAAATTGTCAAGGGAATCAACTTTTCTGGAAACTGATAC 27903
Query 27235 GCTCCAAAATTATTTGAACAATTTGTTATAACTGTCGGAATACCATAAGTACGATGCCAC 27294
|||||| ||||||| || | ||| || | || | || | |||||||| || |||||
Sbjct 27902 GCTCCATAATTATTAGAGCTATTAGTAACAATAGCAGGCAATCCATAAGTCCGCTGCCAA 27843
Query 27295 GCTCTTACCAAATGATCGCTTGCAGCTTTAGATGCAGCATATGGACTACTTGGTTTATAA 27354
||||| || ||||||||||| || ||||| || || |||||||||||||| || |||
Sbjct 27842 GCTCTGACTAAATGATCGCTGGCCGCTTTTGAAGCGGCATATGGACTACTAGGCGCATAG 27783
Query 27355 GGATTCTGTTCTGTAAACGGATAATCT--CCTTCTTCCAGATCACCATACACTTCATCTG 27412
| | ||| ||||| | |||| | ||| || |||||||| || ||||| |
Sbjct 27782 GCTGTGGCTTCATTAAACAAGTCATCTGAGCCACTT--AGGTCACCATAAACCTCATCCG 27725
Query 27413 TTGAAATATGATGGAA 27428
| |||| ||||| ||
Sbjct 27724 TAGAAACGTGATGAAA 27709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475314674297760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |