Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq4101 212 2e-49
seq3386 102 3e-16
>seq4101
Length=142893
Score = 212 bits (234), Expect = 2e-49
Identities = 291/404 (72%), Gaps = 2/404 (0%)
Strand=Plus/Plus
Query 188774 TAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTAC 188833
|| ||||||| || || || || ||||| || | || ||||| |||| ||||||
Sbjct 124661 TAATTGGCCCAACAGGCTCTGGCAAAACTTTGCTGGCGCAAACTATGGCGCGCATGTTAA 124720
Query 188834 ATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAG 188893
| || ||| | | || ||||||| || | ||||| || ||||||||||| |||||||
Sbjct 124721 ACGTGCCTTTCGTGATGGCTGATGCCACCACCTTAACCGAGGCTGGTTATGTCGGTGAAG 124780
Query 188894 ATGTGGAAAACGTATTGCTTCGTTTAATCCAAG-CAGCTGATTACGATATCGAATTAGCG 188952
||||||| ||| | ||| | ||||| | || || ||| | || ||| ||||
Sbjct 124781 ATGTGGAGAACATTGTGCAAAAACTGCTCCAAAACTGC-GAATACAAAATTGAAGAAGCG 124839
Query 188953 GAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACA 189012
| || |||||| | || || |||||| | ||||| ||| | | ||| |||| | | ||
Sbjct 124840 CAGCGCGGAATTATTTACATTGATGAAATTGATAAGATTTCCCGCAAAGCAGACAACCCA 124899
Query 189013 TCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAA 189072
||||||||||| ||||| ||||||||||||||||| ||||| | |||||| | ||||||
Sbjct 124900 TCCATTACCCGTGATGTTTCTGGCGAAGGAGTACAACAAGCCCTTTTAAAATTGATTGAA 124959
Query 189073 GGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTT 189132
|| || || || || || |||| ||||| || || ||||| || | ||||| | |
Sbjct 124960 GGAACTGTCGCCAACGTGCCTCAACAAGGCGGACGCAAACATCCAAATCAAGAGCTTTTG 125019
Query 189133 GAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTT 189176
|| | || || || || || ||||||||| |||||| || ||
Sbjct 125020 CAAGTTGACACCACCAACATTTTGTTTATTTGTGGTGGTGCATT 125063
>seq3386
Length=122896
Score = 102 bits (112), Expect = 3e-16
Identities = 101/131 (77%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 46576 AAACAATTTTGTTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGATTCGTTAT 46635
|||||||||||||| | || |||||||| || || ||||| ||||||||| ||||||
Sbjct 109308 AAACAATTTTGTTTGTTGATGAAATACACCGATTTAATAAGTCTCAGCAAGATGCGTTAT 109249
Query 46636 TACCTTATGTTGAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAATCCATTTT 46695
| ||||| | ||| || ||| || || || |||||||| ||||||||||| | ||
Sbjct 109248 TGCCTTACGCAGAAAGCGGCGAAATAACATTTATCGGTGCAACCACTGAAAATCCTTCTT 109189
Query 46696 TTGAAATTAAC 46706
||||| | |||
Sbjct 109188 TTGAAGTCAAC 109178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1591513221837504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |