Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq17788 104 2e-17 >seq17788 Length=7208 Score = 104 bits (114), Expect = 2e-17 Identities = 158/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || |||||||| | ||| ||||| || || || ||||| |||||||| || | Sbjct 2412 CGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGAGAGTGTTCGACCA 2353 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || ||||| ||||| || ||||| || | ||| || |||||| | || | ||||||||| Sbjct 2352 TCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGAATTCCTTCTTTG 2293 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||| || | || |||| || | ||||| | ||| || |||| ||||| Sbjct 2292 TCCTGAATCTT-GGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGACCTCAAGAGTGAT 2234 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 || ||||| || | ||||| ||||| |||||||| |||| Sbjct 2233 GGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCAT-GTTG 2194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328625989604160