Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq12138 87.8 7e-13 >seq12138 Length=25834 Score = 87.8 bits (96), Expect = 7e-13 Identities = 95/125 (76%), Gaps = 6/125 (5%) Strand=Plus/Plus Query 16916 TTATGACCGGGCGTGCGGCTAATACAATACCAGCAATGGGAATATGCCCGCCGACTACTT 16975 ||||| ||||| ||| ||||||||||| ||| | || |||| |||||| ||| | Sbjct 7318 TTATGGCCGGGTGTGAGGCTAATACAAGACCCTTAGGGGAAATACGCCCGCGGACCTATG 7377 Query 16976 GCGGTTTTGAGCGCCCGGTCACCCTCTCAAAAGGGGTAAA----TCAAAATATCAAGTAG 17031 | ||||||||| ||||| | ||||||||||||||| ||| |||||| |||| ||| Sbjct 7378 ACCGTTTTGAGCACCCGGCCGCCCTCTCAAAAGGGGCAAACTTCTCAAAAAATCA--TAG 7435 Query 17032 GACAC 17036 || || Sbjct 7436 GAGAC 7440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200464413050980