Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq6120 116 4e-21
>seq6120
Length=7451
Score = 116 bits (128), Expect = 4e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 146878 AGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTG 146937
|| || ||||| ||||| |||| | |||| ||| |||| || || | ||||||
Sbjct 5070 AGTTTCGGGAATGGTCGTGGGTGACGCGCCAACTGTTCCTTCAATGGTTCTATGTGGTTA 5011
Query 146938 AGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACG 146997
|||||| || || || || || ||||| || ||||| ||||| |||||||| |||||
Sbjct 5010 CTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTCTCCCGGTTTAAGGCCCGTCACA 4951
Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057
|| || | |||||| || ||||| | || ||| ||||| ||||| || ||||| |||
Sbjct 4950 TGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGATGTTAAAGGGCACACCCAGACCC 4891
Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCG 147099
|| || | | || ||||||||||| || | ||| |||
Sbjct 4890 ATATCTGCGCTGCGTTGATACAGCTGGCAAGACAACTCACCG 4849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583345971727200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |