Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6120 116 4e-21 >seq6120 Length=7451 Score = 116 bits (128), Expect = 4e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 146878 AGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTG 146937 || || ||||| ||||| |||| | |||| ||| |||| || || | |||||| Sbjct 5070 AGTTTCGGGAATGGTCGTGGGTGACGCGCCAACTGTTCCTTCAATGGTTCTATGTGGTTA 5011 Query 146938 AGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACG 146997 |||||| || || || || || ||||| || ||||| ||||| |||||||| ||||| Sbjct 5010 CTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTCTCCCGGTTTAAGGCCCGTCACA 4951 Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || || | |||||| || ||||| | || ||| ||||| ||||| || ||||| ||| Sbjct 4950 TGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGATGTTAAAGGGCACACCCAGACCC 4891 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCG 147099 || || | | || ||||||||||| || | ||| ||| Sbjct 4890 ATATCTGCGCTGCGTTGATACAGCTGGCAAGACAACTCACCG 4849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583345971727200