Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq7139 100 4e-16
>seq7139
Length=3176
Score = 100 bits (110), Expect = 4e-16
Identities = 197/289 (68%), Gaps = 2/289 (1%)
Strand=Plus/Plus
Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467
||||| | ||||| | ||||||||| || || | || |||| | ||| ||
Sbjct 1299 GCTAAGATGTATGGCTTCTGGATTGTAGTTAATTATCGTGAAGCTTATAGTATGTTTGCT 1358
Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527
| | || ||||| || || || || |||||||| || ||||| | ||| || || |||
Sbjct 1359 TGCAACGGCATTCTTTTTAATCACGAATCACCACGTCGTGGTGAAAATTTTGTTACACGT 1418
Query 161528 AAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTA-CAGGATTGTCTATACCTAGG 161586
||||| ||| | | | || || | | | | | | | |||| | | | | ||
Sbjct 1419 AAGATCACTCGTTCAGTCGCCAAAAT-ATTTCTGAATCAGCTAGATTATTTTGAGTTGGG 1477
Query 161587 TAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTT 161646
||||| |||||| ||| ||||||||||| |||| |||||||| || ||||||||| |
Sbjct 1478 GAATCTGGACTCAAAACGTGATTGGGGTCACGCTGCTGACTATGTCGAAGCTATGTGGAT 1537
Query 161647 GATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAA 161695
|||| | || ||||| |||| || ||||| ||||| || ||| ||
Sbjct 1538 GATGCTTCAGCAGGATGATCCTTCGGATTATGTCATTGCTACTGGTGAA 1586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729751926011240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |