Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq7139 100 4e-16 >seq7139 Length=3176 Score = 100 bits (110), Expect = 4e-16 Identities = 197/289 (68%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467 ||||| | ||||| | ||||||||| || || | || |||| | ||| || Sbjct 1299 GCTAAGATGTATGGCTTCTGGATTGTAGTTAATTATCGTGAAGCTTATAGTATGTTTGCT 1358 Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527 | | || ||||| || || || || |||||||| || ||||| | ||| || || ||| Sbjct 1359 TGCAACGGCATTCTTTTTAATCACGAATCACCACGTCGTGGTGAAAATTTTGTTACACGT 1418 Query 161528 AAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTA-CAGGATTGTCTATACCTAGG 161586 ||||| ||| | | | || || | | | | | | | |||| | | | | || Sbjct 1419 AAGATCACTCGTTCAGTCGCCAAAAT-ATTTCTGAATCAGCTAGATTATTTTGAGTTGGG 1477 Query 161587 TAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTT 161646 ||||| |||||| ||| ||||||||||| |||| |||||||| || ||||||||| | Sbjct 1478 GAATCTGGACTCAAAACGTGATTGGGGTCACGCTGCTGACTATGTCGAAGCTATGTGGAT 1537 Query 161647 GATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAA 161695 |||| | || ||||| |||| || ||||| ||||| || ||| || Sbjct 1538 GATGCTTCAGCAGGATGATCCTTCGGATTATGTCATTGCTACTGGTGAA 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729751926011240