Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq10147 87.8 2e-12
>seq10147
Length=26039
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363
||||||||| ||||||| || || ||| || || ||| |||| || ||||| || ||
Sbjct 13107 AGTGAAAATATAACGAGCACTGGCGCAATCTTTACCGCCAACAAGTCGGGTACCAAACTG 13048
Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423
|| | |||||| | | || | ||| || | || ||||||||||| ||||| || ||
Sbjct 13047 ACCGCGCGGCTCAAGCAAATTAATGTTATTCGAACCGACAAAGTTTTGTGCCAAATTAAC 12988
Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCC 117483
||| || |||||| | ||||| || ||||| || | | ||| ||||| | ||
Sbjct 12987 AATAGTCATTTGGAGTGAGACTTCACCGTGATGATATGCTGACATCTCTGCCACTGAACC 12928
Query 117484 CGCCAGCTGAGCCACCTT 117501
| || || ||||| ||
Sbjct 12927 GGACAATTGTGCCACTTT 12910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547082800785400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |