Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq10147 87.8 2e-12 >seq10147 Length=26039 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363 ||||||||| ||||||| || || ||| || || ||| |||| || ||||| || || Sbjct 13107 AGTGAAAATATAACGAGCACTGGCGCAATCTTTACCGCCAACAAGTCGGGTACCAAACTG 13048 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || | |||||| | | || | ||| || | || ||||||||||| ||||| || || Sbjct 13047 ACCGCGCGGCTCAAGCAAATTAATGTTATTCGAACCGACAAAGTTTTGTGCCAAATTAAC 12988 Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCC 117483 ||| || |||||| | ||||| || ||||| || | | ||| ||||| | || Sbjct 12987 AATAGTCATTTGGAGTGAGACTTCACCGTGATGATATGCTGACATCTCTGCCACTGAACC 12928 Query 117484 CGCCAGCTGAGCCACCTT 117501 | || || ||||| || Sbjct 12927 GGACAATTGTGCCACTTT 12910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547082800785400