Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq17788 154 2e-32
seq10147 111 2e-19
>seq17788
Length=7208
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || || || || ||||| || ||||||||||| || |
Sbjct 2198 ATGCAGATTTTTGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCTTCG 2257
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | || || || ||||||||||| || |||||||||||||| ||
Sbjct 2258 GACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAA 2317
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| |||||||| |||||||| || || | || |||| ||| || || | || ||||||
Sbjct 2318 CAACGTCTAATCTTTGCTGGCAAACAGTTGGAAGATGGTCGAACACTCTCTGATTATAAT 2377
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| || ||||| ||| | ||| | || ||||| ||||| ||||||
Sbjct 2378 ATCCAGAAAGAATCGACTTTGCATTTGGTTTTGCGCCTTCGTGGTGGA 2425
>seq10147
Length=26039
Score = 111 bits (122), Expect = 2e-19
Identities = 237/352 (67%), Gaps = 4/352 (1%)
Strand=Plus/Plus
Query 32053 AAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCG 32112
|| ||||| || |||| || | ||||||||| | || ||||| ||||| || |
Sbjct 12910 AAAGTGGCACAATTGTCCGGTTCAGTGGCAGAGATGTCAGCATATCATCACGGTGAAGTC 12969
Query 32113 TCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAAC 32172
|| ||||| || ||||| || | || || |||||||||||| | |||||| | ||
Sbjct 12970 TCACTCCAAATGACTATTGTTAATTTGGCACAAAACTTTGTCGGTTCGAATAACATTAAT 13029
Query 32173 TTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGC 32232
|| || ||||| || |||||||| ||||| || | || || || ||| || ||
Sbjct 13030 TTGCTTGAGCCGCGCGGTCAGTTTGGTACCCGACTTGTTGGCGGTAAAGATTGCGCCAGT 13089
Query 32233 TCCCGTTACATCTTCAC--CCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGG 32290
| ||||| || ||||| | |||| ||| || || ||||| |||||| ||
Sbjct 13090 GCTCGTTATATTTTCACTTTGATGTCGCCGCTT--ACACGTCTTATTTTTCACCCGTTGG 13147
Query 32291 ACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACA 32350
| ||| | |||| ||| | |||| || || ||||| | ||||| | || |
Sbjct 13148 ATGATCCTTTGCTGTCATACCAGGTTGACGATGGCCAGCGCATTGAGCCAAATTGGTATA 13207
Query 32351 GTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
|| | | |||||| | |||||||||||||||||||| || || || ||
Sbjct 13208 TACCAATTATACCGATGGTGTTGGTGAACGGTGCAGAAGGTATTGGCACTGG 13259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570171579319760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |