Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq17463 176 2e-39 >seq17463 Length=6653 Score = 176 bits (194), Expect = 2e-39 Identities = 144/174 (83%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 20421 AAACAAGGAGGCCATAAAACGGGCCACGCCAGAAGGCGTCATGAACTGGCCGAACTCTGC 20480 || || ||| |||||||| |||||||||| |||||||||||||||| ||||||||| || Sbjct 3499 AATCAGGGACGCCATAAAGCGGGCCACGCTCGAAGGCGTCATGAACTAGCCGAACTCGGC 3558 Query 20481 TTTGTGTTTACGCGCGGTACGGGGAGACAGCTCGCGACGCACGCTGTCTGCGACGTCTAG 20540 ||||||||| ||||||||||||| | || |||| | ||||||||||||||| |||||| Sbjct 3559 TTTGTGTTTCTGCGCGGTACGGGGTGCCACCTCGAGGCGCACGCTGTCTGCGGTGTCTAG 3618 Query 20541 CTTTTGAAGCATAACTAATCCTC-TTTACGTGGCATGATGATGCCAACGTGCTT 20593 | ||||| ||| | | ||||| || ||| ||| |||||| ||| |||||||| Sbjct 3619 TTGTTGAAACATCCCAAGTCCTCATTGACGCGGCGTGATGACGCCGACGTGCTT 3672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203247752332090