Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6120 91.5 1e-13 >seq6120 Length=7451 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 29896 GTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29955 |||||| ||||| || || || |||| || || |||||||||| || || || || || Sbjct 5008 GTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTCTCCCGGTTTAAGGCCCGTCACATG 4949 Query 29956 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 30015 ||| ||||||||||| || || | || ||||||||||||||| || || || ||||| Sbjct 4948 AGCTATCATGTACGTAAGCAGTGCATACGAGGCGATGTTAAAGGGCACACCCAGACCCAT 4889 Query 30016 GTC 30018 || Sbjct 4888 ATC 4886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406213971495516