Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq489 118 7e-22 >seq489 Length=77466 Score = 118 bits (130), Expect = 7e-22 Identities = 161/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||| || || ||||||||||||||| || || |||||||| || Sbjct 4403 AGACGGAGTACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAAAGTGTGCGT 4462 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||| || |||||||| || | |||||||||||| || || | ||||| Sbjct 4463 CCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCT 4522 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || || | || ||||| ||| || |||| ||| Sbjct 4523 TTGTCCTGGATC-TTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGT 4581 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || |||||||| | ||||| || || |||||||| || Sbjct 4582 AATGGTCTTACCGGTGAGAGTTTTGACGAATATCTGCATTTT 4623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314654906109209