Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_028660.1
Length=61035
Score E
Sequences producing significant alignments: (Bits) Value
seq17463 176 2e-39
seq12138 86.0 2e-12
>seq17463
Length=6653
Score = 176 bits (194), Expect = 2e-39
Identities = 144/174 (83%), Gaps = 1/174 (1%)
Strand=Plus/Minus
Query 16832 AAGCACGTTGGCATCATCATGCCACGTAAA-GAGGATTAGTTATGCTTCAAAAGCTAGAC 16890
|||||||| ||| |||||| ||| ||| || ||||| | | ||| ||||| | ||||||
Sbjct 3672 AAGCACGTCGGCGTCATCACGCCGCGTCAATGAGGACTTGGGATGTTTCAACAACTAGAC 3613
Query 16891 GTCGCAGACAGCGTGCGTCGCGAGCTGTCTCCCCGTACCGCGCGTAAACACAAAGCAGAG 16950
||||||||||||||| | |||| || | ||||||||||||| ||||||||||| |||
Sbjct 3612 ACCGCAGACAGCGTGCGCCTCGAGGTGGCACCCCGTACCGCGCAGAAACACAAAGCCGAG 3553
Query 16951 TTCGGCCAGTTCATGACGCCTTCTGGCGTGGCCCGTTTTATGGCCTCCTTGTTT 17004
|||||| |||||||||||||||| |||||||||| |||||||| ||| || ||
Sbjct 3552 TTCGGCTAGTTCATGACGCCTTCGAGCGTGGCCCGCTTTATGGCGTCCCTGATT 3499
>seq12138
Length=25834
Score = 86.0 bits (94), Expect = 2e-12
Identities = 93/122 (76%), Gaps = 6/122 (5%)
Strand=Plus/Plus
Query 20823 TTATGACCGGGCGTGCGGCTAATACAATACCAGCAATGGGAATATGCCCGCCGACTACTT 20882
||||| ||||| ||| ||||||||||| ||| | || |||| |||||| ||| |
Sbjct 7318 TTATGGCCGGGTGTGAGGCTAATACAAGACCCTTAGGGGAAATACGCCCGCGGACCTATG 7377
Query 20883 GCGGTTTTGAGCGCCCGGTCACCCTCTCAAAAGGGGTAAA----TCAAAATATCAAGTAG 20938
| ||||||||| ||||| | ||||||||||||||| ||| |||||| |||| |||
Sbjct 7378 ACCGTTTTGAGCACCCGGCCGCCCTCTCAAAAGGGGCAAACTTCTCAAAAAATCA--TAG 7435
Query 20939 GA 20940
||
Sbjct 7436 GA 7437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 195145263805922
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |