Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_028685.1
Length=62851
Score E
Sequences producing significant alignments: (Bits) Value
seq17463 176 2e-39
seq12138 86.0 3e-12
>seq17463
Length=6653
Score = 176 bits (194), Expect = 2e-39
Identities = 144/174 (83%), Gaps = 1/174 (1%)
Strand=Plus/Plus
Query 18759 AAACAAGGAGGCCATAAAACGGGCCACGCCAGAAGGCGTCATGAACTGGCCGAACTCTGC 18818
|| || ||| |||||||| |||||||||| |||||||||||||||| ||||||||| ||
Sbjct 3499 AATCAGGGACGCCATAAAGCGGGCCACGCTCGAAGGCGTCATGAACTAGCCGAACTCGGC 3558
Query 18819 TTTGTGTTTACGCGCGGTACGGGGAGACAGCTCGCGACGCACGCTGTCTGCGACGTCTAG 18878
||||||||| ||||||||||||| | || |||| | ||||||||||||||| ||||||
Sbjct 3559 TTTGTGTTTCTGCGCGGTACGGGGTGCCACCTCGAGGCGCACGCTGTCTGCGGTGTCTAG 3618
Query 18879 CTTTTGAAGCATAACTAATCCTC-TTTACGTGGCATGATGATGCCAACGTGCTT 18931
| ||||| ||| | | ||||| || ||| ||| |||||| ||| ||||||||
Sbjct 3619 TTGTTGAAACATCCCAAGTCCTCATTGACGCGGCGTGATGACGCCGACGTGCTT 3672
>seq12138
Length=25834
Score = 86.0 bits (94), Expect = 3e-12
Identities = 93/122 (76%), Gaps = 6/122 (5%)
Strand=Plus/Minus
Query 14821 TCCTACTTGATATTTTGA----TTTACCCCTTTTGAGAGGGTGACCGGGCGCTCAAAACC 14876
||||| |||| |||||| ||| ||||||||||||||| | ||||| |||||||||
Sbjct 7437 TCCTA--TGATTTTTTGAGAAGTTTGCCCCTTTTGAGAGGGCGGCCGGGTGCTCAAAACG 7380
Query 14877 GCAAGTAGTCGGCGGGCATATTCCCATTGCTGGTATTGTATTAGCCGCACGCCCGGTCAT 14936
| | ||| |||||| |||| || | ||| ||||||||||| ||| ||||| |||
Sbjct 7379 GTCATAGGTCCGCGGGCGTATTTCCCCTAAGGGTCTTGTATTAGCCTCACACCCGGCCAT 7320
Query 14937 AA 14938
||
Sbjct 7319 AA 7318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200950697615036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |