Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq2611 82.4 2e-11 >seq2611 Length=130202 Score = 82.4 bits (90), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 31251 TTTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTA 31310 ||||||| | | || |||||||||||| |||||||||||||||||||||||||||||| Sbjct 122441 TTTTGGCAGGGGAGGAAGGATTCGAACCCTCGAATGCCGGAATCAAAATCCGGTGCCTTA 122500 Query 31311 --CCGCTTGGCGAC 31322 | ||||||||| Sbjct 122501 ACCAACTTGGCGAC 122514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138166442742862