Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_028995.1 Length=43216 Score E Sequences producing significant alignments: (Bits) Value seq10695 147 6e-31 >seq10695 Length=46784 Score = 147 bits (162), Expect = 6e-31 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 9032 GATATGAAGTTAACTGAATTTTTAGAAAAAATTGGAAATGAAAACTTGAAAATTCAAGTT 9091 || |||| ||||| |||||||||| |||||| || ||||| || | ||||| || Sbjct 2059 GAGATGACATTAACGGAATTTTTAGGAAAAATAGGCAATGAGAATCTAGCTATTCAGATT 2118 Query 9092 TTGCACAATTCAATTGTTTCCGAGAGaaaaacaaaaaaCGATATAGAAATTACATTTGCA 9151 || || | || || | ||||||| |||||| ||| | ||||| ||| | || |||||| Sbjct 2119 TTACATGACTCTGTTATCTCCGAGAAAAAAACCAAAGAAGATATTGAAGTGACTTTTGCA 2178 Query 9152 ACAGAAAATGGTAATTCTCAAATTTTAAGTAAAAGTAATCGTGTTGGTATTGTGGTTTGG 9211 |||||| || ||||| | || | ||| || || ||||| |||||||||||| Sbjct 2179 ACAGAATCCAAAAACACTCAACTATTGGGAAAATCAAAACGAGTTGGCATTGTGGTTTGG 2238 Query 9212 ATGGATGCTGAGAAATACAATGAGGCTATAAAATGA 9247 ||||||||||| || ||||| ||||||||||||||| Sbjct 2239 ATGGATGCTGATAAGTACAACGAGGCTATAAAATGA 2274 Score = 102 bits (112), Expect = 2e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 37759 ATGAAAATGACAAAAGGTGGCTTTGATATATTACGCAAAGCCTTTGGCTCACTTACTCAG 37818 ||||| |||||| |||||| ||| ||||| | || || || || | | | || Sbjct 23531 ATGAAGATGACAGCAGGTGGATTTAATATACTGCGTAATAATTTAGGTCGATTAAACCAA 23590 Query 37819 ACACAAGTGAACGCTATTAATTTCTTAATTGATGAGTTTGACAAAGACAAATCAATCAGC 37878 | ||||| | |||||||| ||| | |||||| || ||||| ||||| || Sbjct 23591 AGCCAAGTTGATCAGATTAATTTTTTAGTATCTGAGTTCGATAAAGATAAATCCATTTCA 23650 Query 37879 TACCCACAAGCATCCTACATGCTTGCTACTACATGGCACGAAACAGCGCGCACGATGCTA 37938 || ||||||||| |||||||||||||||| |||||||| ||||| ||| || ||||| Sbjct 23651 TATCCACAAGCAGCCTACATGCTTGCTACCACATGGCATGAAACTGCGACAACCATGCTG 23710 Query 37939 CCTATCAAGGA 37949 ||||| |||| Sbjct 23711 CCTATTGAGGA 23721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138137649402628