Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq6120 100 2e-16 >seq6120 Length=7451 Score = 100 bits (110), Expect = 2e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 118465 TTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCA 118524 |||| ||| || ||||| || | |||||||||||||| |||| || || | ||| || Sbjct 5031 TTCAATGGTTCTATGTGGTTACTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTCT 4972 Query 118525 CCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACA 118584 || ||| |||| || |||| ||||| |||||||| || | || || ||| | Sbjct 4971 CCCGGTTTAAGGCCCGTCACATGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGATG 4912 Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCC 118644 ||||| || |||||||||||||| ||||| | || |||| |||||||| | ||| Sbjct 4911 TTAAAGGGCACACCCAGACCCATATCTGCGCTGCGTTGATACAGCTGGCAAGACAACTCA 4852 Query 118645 CCG 118647 ||| Sbjct 4851 CCG 4849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414378433386772