Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq489 159 8e-34 >seq489 Length=77466 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || ||||| ||||| ||||| || || | ||| || | |||||||||||| ||| Sbjct 4418 TGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCATCTTCCAGTTGC 4477 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || ||||| || || |||||||| || |||| || || |||||||||||||| Sbjct 4478 TTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTA 4537 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || || || |||||||||||||| |||||||| | || || ||||| || ||| Sbjct 4538 GCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGTCTTACCGGTG 4597 Query 211092 AGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || || | ||||||||| Sbjct 4598 AGAGTTTTGACGAATATCTGCATTTT 4623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158862794111645