Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq17788 82.4 6e-11 >seq17788 Length=7208 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/121 (76%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--AT 101084 || |||| |||||||| |||||||| || ||||| ||||| | | ||| || || || Sbjct 2409 AAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAG--AGAGTGTTCGACCAT 2352 Query 101085 CTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGT 101144 ||||||| |||||||| ||| | || || | |||||| ||| || | |||||||||| Sbjct 2351 CTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGAATTCCTTCTTTGT 2292 Query 101145 C 101145 | Sbjct 2291 C 2291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409563576354507