Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq6120 120 2e-22 >seq6120 Length=7451 Score = 120 bits (132), Expect = 2e-22 Identities = 135/179 (75%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 29651 GGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGT 29710 ||||| | ||||| | |||||| |||||||| || || ||||| || || ||||||||| Sbjct 5025 GGTTCTATGTGGTTACTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTCTCCCGGT 4966 Query 29711 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 29770 | || || || || ||||| ||||||||||| || || | || ||||||||||||| Sbjct 4965 TTAAGGCCCGTCACATGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGATGTTAAAG 4906 Query 29771 GGCACCCCGAGCCCCATGTC--CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCG 29827 ||||| || || ||||| || | ||| | || || |||||||| || | ||| ||| Sbjct 4905 GGCACACCCAGACCCATATCTGCGCTG--CGTTGATACAGCTGGCAAGACAACTCACCG 4849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406066806430078