Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4404 113 4e-20 >seq4404 Length=3800 Score = 113 bits (124), Expect = 4e-20 Identities = 185/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 ||||| ||||| |||| | |||||||||||| || || | |||||| || ||||| || Sbjct 2399 ATATAGGTGTCGATTAAAACGCTATACATTTCGGAGTGCACATTTTCCATGGCAATTTGG 2340 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937 || || || ||||| | || || || ||||||||||| | | || | || || || Sbjct 2339 AAGCCATAGAAGCAACGTGCCTCAGTCACTTGAACTTCTTGGCTGAAACGCTCGACCAAA 2280 Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTAC 4997 ||||| || || || || || || ||||| || ||||| || || ||||| || | Sbjct 2279 TTTTCATTCACAATGCCATCGGAAGCAGCAAAGAAAGCCAACACGTGCGATATGAAATGA 2220 Query 4998 TGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCA 5057 | |||| | |||| || ||| | | ||| || || | | ||| ||||| ||| Sbjct 2219 CGCTCGTTATCAGTAAGCTTAGCCCAATCTGTCAAGTCCTTCGACAGATCTACTTCCTCA 2160 Query 5058 ACAGTCCAAAACGACGCTTCCGCTTTT 5084 || ||||| || || || || || ||| Sbjct 2159 ACTGTCCAGAATGATGCCTCTGCCTTT 2133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426948249519509