Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6120 98.7 7e-16 >seq6120 Length=7451 Score = 98.7 bits (108), Expect = 7e-16 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 27138 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 27197 ||||| ||||| | ||| | |||||| ||||| || || || ||||| || || || Sbjct 5032 CTTCAATGGTTCTATGTGGTTACTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTC 4973 Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257 |||||||| || || || || ||||| ||||||||||| || || | || |||||| Sbjct 4972 TCCCGGTTTAAGGCCCGTCACATGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGAT 4913 Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTC 27284 ||||||||| || || || ||||| || Sbjct 4912 GTTAAAGGGCACACCCAGACCCATATC 4886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369419505895463