Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
seq12641 223 2e-53
>seq12641
Length=70532
Score = 223 bits (246), Expect = 2e-53
Identities = 577/875 (66%), Gaps = 6/875 (1%)
Strand=Plus/Plus
Query 78284 AACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACCCTT 78343
|| || ||| |||| ||||| || || | || || || || ||||| |||| || ||
Sbjct 61663 AATTTTTGGCTGCCGGAGAAAGTGCCACTTTCAAATGATATTCCATCTTGGGCAACGCTA 61722
Query 78344 ACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGACACC 78403
||| || ||||| | || || || || |||||||| || || | || || || || ||
Sbjct 61723 ACGGCGCAAGAGCAAGAGCTGACCATTCGTGTGTTTACAGGTTTGACGCTACTTGATACG 61782
Query 78404 ATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAGGAG 78463
| ||| || || || | | | || | || || || || ||||| |||
Sbjct 61783 GTACAGAATGTGGTAGGTGCTTTGTGTTTGATTCCAGATGCTGTGACGCCACACGAAGAG 61842
Query 78464 GCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCGATC 78523
|||| ||||| ||| | || ||||| |||||||||| || ||||| || ||
Sbjct 61843 TCGGTTTATACCAATATCTCTTTTATGGAAGCGGTACACGCGAAAAGTTACAGTTCAATT 61902
Query 78524 TTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAGAAC 78583
|| || || ||||| ||| | | || || || || || ||| || |||
Sbjct 61903 TTTTCTACTCTATGTCAGATGAAGGATGTGGATGAAGCATTTCGCTGGAGCATAGAAAAC 61962
Query 78584 GAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCCCTTG 78643
|| | |||||| |||||| |||| || ||| | || || || || ||||| ||
Sbjct 61963 GAATTCCTGCAAAACAAGGCAAAGATTGTATTGGGGCATTATCGTGGGGATGACCCTTTA 62022
Query 78644 AAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCTACCTG 78703
| ||| ||||| ||||| || | ||| || | ||||| || ||||| || ||
Sbjct 62023 ATGCGTAAGGTTGCCAGCGTTTTCTTAGAGTCATTTTTATTCTATTCTGGCTTTTATTTG 62082
Query 78704 CCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTGATT 78763
|| ||||||||| || || || || |||| || || |||||| | ||| | ||||||
Sbjct 62083 CCAATGTACTGGAGTAGTCGAGCAAAATTGACTAATACGGCGGACTTAATCAGATTGATT 62142
Query 78764 ATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTCGAG 78823
|| || || ||||| || || || || ||||| || || || | |||| || | | |
Sbjct 62143 ATTCGTGATGAAGCGGTGCACGGTTATTACATTGGTTATAAATTTCAGCAAGCCTACAAT 62202
Query 78824 AC--CCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCGATCTGCTCTCGG 78881
| ||| | | | | || | ||| | || | ||| | | || |||| |
Sbjct 62203 AAAGCCACGCCTAGTCAC--CAAGAAGAGGTGAAAAACTACGCTTATGAATTGCTTCATG 62260
Query 78882 AGCTCTACGACAACGAGTGTGACTACACCGAGCAGCTCTATGACGACGTCGGACTCACCG 78941
| | || || ||||| | ||||| ||| | | || |||| || || ||||
Sbjct 62261 ATTTGTATGATAACGAAGTCAAGTACACGGAGGATTTATACGACGCTGTTGGCTGGACCG 62320
Query 78942 AGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGAACCTCGGCTACG 79001
| ||||| ||||||||| ||| |||||||| ||||||||| | ||||| | || | |
Sbjct 62321 AAGATGTAAAGAAGTTCTTGCACTACAACGCCAACAAGGCTTTAATGAATTTGGGTTTTG 62380
Query 79002 AAGCACTGTTCCCCAAGGAAGAGACC-ATGGCAGACCCGGCCATCATGTCCGCGCTCTCA 79060
||||||| || || | || ||| | | ||||| ||| | | || || ||
Sbjct 62381 AAGCACTCTTTCCTAGCTCTACTACGGATGTGA-ATCCGGCAATCTTAGCGGCCCTATCG 62439
Query 79061 CCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCGGC 79120
||| ||| || || || || || |||||||| || || |||||| || ||||| ||
Sbjct 62440 CCAAGCGCGGATGAAAATCATGATTTCTTCTCGGGTTCTGGCTCGTCATATGTCATTGGT 62499
Query 79121 AAAGCTGAAGCCACGGCAGATGAGGACTGGGACTT 79155
||||||||||| || ||||||||||||||||||||
Sbjct 62500 AAAGCTGAAGCTACAGCAGATGAGGACTGGGACTT 62534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299250562846514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |