Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq1420 95.1 2e-14 >seq1420 Length=85926 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 99860 TGTCAGCTTTATCAACGCAGCGCCGATGTGTTCTTAGGGGTGCCGTTTAATATTGCGTCA 99919 || |||||||| || || || || || |||| ||||| ||||||||||||||||| Sbjct 4054 TGCCAGCTTTACCAGCGAAGTGCAGACATGTTTTTAGGTGTGCCGTTTAATATTGCCAGC 3995 Query 99920 TACGCTTTGTTGATCCACATGTTTGCACAGCAGGCTAACATGACCGTGGGTGATTTCGTC 99979 || || || || | |||||| |||||||||| |||| || |||||||| || || Sbjct 3994 TATGCATTATTAACACACATGGTTGCACAGCAAACTAATTTGCAAGTGGGTGACTTTATC 3935 Query 99980 TGGTCTGGTGGTGAC 99994 ||| ||||||| ||| Sbjct 3934 TGGACTGGTGGCGAC 3920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716289603706600