Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1169 776 0.0
seq4404 187 4e-42
>seq1169
Length=8375
Score = 776 bits (860), Expect = 0.0
Identities = 1290/1849 (70%), Gaps = 22/1849 (1%)
Strand=Plus/Plus
Query 75397 TGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAA 75456
||| || ||||| |||| ||| ||||| |||||||| ||||| ||||| || ||
Sbjct 851 TGCCGGCTTTGTGCGTAAATAATACATTCCAGTTTTAAGACCTGCTTTCCATGAATAAAA 910
Query 75457 ATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACT 75516
|| || || | ||| |||| | || ||||| | ||| ||||| | ||||| ||
Sbjct 911 GTGTATTGAAGTCAATTTACCATAATTTGGTTCGGCGACATGTATATTGAATGACTGGCT 970
Query 75517 TTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTC 75576
||| || ||||||||||||||||| || ||||||||||| | | ||| || ||| ||
Sbjct 971 TTGGTCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATTGTTGATTTTACAGAAATCTC 1030
Query 75577 CCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATGGA 75633
||| | |||||| | | | | ||| ||| | |||| || ||| |||||| ||
Sbjct 1031 CCAGACAGTTTTATATAAGTCTCTGACATCTTTAGGAATTGTTTCAATATGTTGAATAGA 1090
Query 75634 TCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAA 75693
|| | | || | || |||| || || ||||||| |||||| | || |||||
Sbjct 1091 ACCACGACTTGACACTATATTATTTTTCATATCATCATCCCACAAATCCAATTCAGTTAA 1150
Query 75694 AACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTA 75753
| | | | | || | | ||||||| |||||| |||||||| || || |||| |||||
Sbjct 1151 ATCACGTAATAAATAATGGTTAACAACTTGAAACTCTCCAGATAAAACCCTTCTGGTGTA 1210
Query 75754 AATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGC 75813
||||| || || ||||| | |||||||| ||||||| |||||||| || |||||
Sbjct 1211 TATATTTGAAGTGTAGGGTTCAAATGATTCATTATTTCCCATGATTTGAGCTGTAGAAGC 1270
Query 75814 AGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTT 75873
|| ||||| ||||| || | | |||||| | |||| || || ||| ||
Sbjct 1271 TGTAGGCATTGGTGCTACAAGGAGGGAATTTCTTACTCCATACTTTTGAATCTTAAGCTT 1330
Query 75874 TAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAAT 75933
|| | || ||||||||| | || | |||| |||| | || |||||||| ||
Sbjct 1331 TAATTGTTGCCAATCCCACAAATTCGTTGGTTTTTTTCCCCACATGTCATATTGTAGGAT 1390
Query 75934 TCCGTTGCTAGCATATGA--TCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGT 75991
||| ||||| ||| | ||| | ||| || || || | || | ||||||||| |||
Sbjct 1391 TCCTTTGCTT--ATAGGGCTTCCCTCATACGTCTCATAGGGACCATACTTTTCAGCCAGT 1448
Query 75992 TCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCT 76051
|| ||||| || ||||| | || |||||| || ||||| ||||| | | ||| | |
Sbjct 1449 TCACAACTTGCTTCTAAGGAACTGTAATATATCGTTTCAAAAATTTGTTGATTTAAAAGA 1508
Query 76052 TGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGA 76111
||||| || ||| | |||||| | | | ||| | ||||| || | ||||||
Sbjct 1509 AAGGCTTCTTCGCTTTCATAGGGATAACGCATTAAAATTAGAGCATCAGCAAAGCCCTGA 1568
Query 76112 ACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAA 76171
|| ||||| |||||||| | ||||||| || || || ||| ||| | | ||| |||
Sbjct 1569 ACGCCAATGCCAATAGGACGATGTCTCAAGTTAGACTTTCGAGCCTCTTGCAAAGGATAA 1628
Query 76172 TAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGT 76231
||||| || || || |||||||| ||||||| |||| ||| || |||||||
Sbjct 1629 TAATTGATGTCAATTATTTTATTTAGATTTCGTGTTACTATTTTCGTTACTTCCTTTAAC 1688
Query 76232 TTGAGAAAATCAAATTTTCCATCTAT---CACAAACATATTAAGAGCTATAGATGCTAGA 76288
|| |||||| ||||| || |||||||||||| | || || ||||| | |
Sbjct 1689 TTTTCGAAATCATATTTTTTTTCCGAGGACACAAACATATTTAAGGCAATCGATGCCAAA 1748
Query 76289 TTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTA 76348
|| || || || | |||| | | ||||| || || || ||||||| ||||||
Sbjct 1749 TTGCATACCGCAATTTCATCTGGTGCAGAATATTCTACAATTTCTGTGCATAAATTACTG 1808
Query 76349 CACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGA 76408
|| || || || |||| ||||||||||||||| ||| | |||||||| || ||| | |
Sbjct 1809 CATTTAATGGTGCCAACATTTTGTTGGTTGCTTTTTCTATTACATGAATCTTTAAACAAC 1868
Query 76409 ACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC-GACTCTAGC 76467
| | | ||||| |||||||| | || | ||| || ||||| ||| | || | | ||
Sbjct 1869 ATATATGGAGTGCCAGTTTCTACTTGAGCTTCAATTATAGAAAACCAAAGAGATTGT-GC 1927
Query 76468 TTTTATTATAG-ATTTGTATCGCTTCTCTCTT--TCATATTGTGTATATAACCGTTCAAA 76524
||| ||| | | ||| ||| | |||| ||||||| | ||||||| ||||||
Sbjct 1928 TTTAATTTTTCTACTTG---CGCGACCTTCTTGTTCATATTTTTCATATAACTTTTCAAA 1984
Query 76525 TTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTC 76584
|| || ||||||||||||| | ||||| |||| || |||||||| | |||||||||
Sbjct 1985 CTCGTCACCCCAAACATCATGAAGGCCAGGGCATTTATGAGGACACATAAGTGACCACTC 2044
Query 76585 ACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATC 76644
| |||||||| || ||||||||||| || || || ||||| ||||| ||||| |||
Sbjct 2045 TCGATCTTCCTCTACTCGTTTCATAAAAAGGTCTGGAATCCAAAGAGCGTAAAATAAATC 2104
Query 76645 TCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATC 76704
|| | ||| ||||||| ||||| ||||| ||||| ||||| | |||||| | ||| ||
Sbjct 2105 ACGAGCTCTGTGTTCTTCCTTTCCAGTATTTTTTTTTAGATCCAAGAACTCGAAAATGTC 2164
Query 76705 AGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATC 76764
| |||||| || |||| ||| || || | | || || | ||| |||||| |||||
Sbjct 2165 TGCATGCCAAGGCTCTAAATAAATAGCAAATGCTCCAGGCCTCTTACCACCTCCTTGATC 2224
Query 76765 TATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACC 76824
|| ||||| || |||||| ||||||| | |||||| | || || || ||||||||
Sbjct 2225 TACATATCGTGCGACATTATTAAAAACTCTAAGCATTGGCACAAGTCCATTCGATGTACC 2284
Query 76825 ATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCC 76884
||| ||||| ||||| || | || |||||||| | || | || ||||||||
Sbjct 2285 ATTAGTTCCCGAAATTGAAGTACCCTTAGCACGAATGCAATGAACATTTATACCTATTCC 2344
Query 76885 TCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACT 76944
|| || ||| || || | ||||| ||| | | | | | ||||| ||||||
Sbjct 2345 ACCGGCAGATTTTGATATCATCGCACATTGTTCTACAGATTTAAAAATGCCTTCTATAGA 2404
Query 76945 ATCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 77003
||| | | || |||||| ||||||||| ||| | ||| || || ||| | |||
Sbjct 2405 ATCCGCTACCATTGTTAA-AAGAAAACATGAAGATAGTTGCGGACGATTGGTTGCAGCAG 2463
Query 77004 TAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 77063
|||||| ||||| |||||||| ||||| | ||| ||||||||||| || ||||| |
Sbjct 2464 CAAACAAAGTAGGTGATGCATGCGTGAAGTAACGTTCCGAAAGTAGATTATAAGTTTCTA 2523
Query 77064 TAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122
| |||| || |||||| || | || || || | || |||||||| ||||| || |||
Sbjct 2524 TTGCTGCATCAATATCCTCACCG-TGTATACCAATCGCAACACGCATTAACATGTGTTGA 2582
Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182
|||| || | |||| |||||||| || || || ||| |||||||||||||||
Sbjct 2583 GGTCTCTCAGCGATCTTTCCGTTTATTTTTAATAAATACGATCGTTCCAAAGTTTTAAAT 2642
Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231
||||||||||| || ||| || | ||||||||||| | |||||||
Sbjct 2643 CCAAAATAGTTATAACCAAAATCACGGTCGTAAATAATTGCGGAATTTA 2691
Score = 91.5 bits (100), Expect = 2e-13
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 77347 tttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTC 77406
||| |||||||| ||||||||||| ||||| || ||||| || |||| ||| || || ||
Sbjct 6615 TTTCTTTGTTTCTTTGTGTAGATTTGATACTGCAATTCTTGCGGCTAAAATGGCGTAATC 6674
Query 77407 AGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGT 77466
| || | |||||| | | ||||| ||||| || |||||| | ||||| || ||
Sbjct 6675 TGCGTGATTTGTAGTCAAACTTGCTGCAATTTCAGCTGCTAAATTGTCTAACTCCTGTGT 6734
Query 77467 AGTAACTCCGTTATATAGCCCTTGAATAACTTT 77499
|||||| || ||| || || | || |||||
Sbjct 6735 AGTAACGCCACAATAAAGACCGTTTATTACTTT 6767
>seq4404
Length=3800
Score = 187 bits (206), Expect = 4e-42
Identities = 409/604 (68%), Gaps = 14/604 (2%)
Strand=Plus/Minus
Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTT 46339
|||||||||| |||| |||| |||| || ||| | ||||| || |||||
Sbjct 3087 TTTAAAAGTCAGCATCCAAAGTAAAAACGTTGTCTAGACGGTTAGACATTACACCCATGC 3028
Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399
||| ||||| ||||| |||||||||||| || || ||||| |||| || || ||
Sbjct 3027 GTTGATATTCGCCTACTTTTTTCTCGAAAAAGTTCGTCTTGCCGTCCAGCGAAATCAATT 2968
Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459
|||| || || ||||| | || || ||||| | || | ||| | |
Sbjct 2967 CCATGAATGTGAATGGATTCTTTGTGTTGTAGATTTTGCCCACGCCGAGTTCAACTAGTA 2908
Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519
| | ||| || || || || ||||| ||||| || ||||||||| || || || |
Sbjct 2907 GGCGATCAGCGACAAACTCAATATATTCCGACATCAGTTTACAATTCATGCCAATCAGGT 2848
Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT-- 46577
| ||||| | || || || | || || || || || |||| || ||||| || ||
Sbjct 2847 TAACCGGCAATGCATCGGTCAAGAATTCCTGCTCTATTTTGACTGCCTCCGAAATGATTT 2788
Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTA-AACATGCAA 46636
| || ||| | | | |||| | |||| |||||| | ||||| | |||| ||||
Sbjct 2787 CAATAATACGCTCT--TTGGTTGGACGCTGCACCAAATGATGGAACATAAGAACA-GCAA 2731
Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696
| ||||| || | |||||||| | ||||||||| || || ||||| | |||||||
Sbjct 2730 AGTCACAGTGTAAACCTTCATCACGCGAAATTAATTCATTGGAGAATGTTAAACCAGGCA 2671
Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756
| || ||||| || || |||||||| || | ||| ||| ||| |||||||||||| |
Sbjct 2670 TAAGGCCACGTTTCTTCAGCCAAAAGATGGACGCAAAACTGCCACTAAAGAATATGCCCT 2611
Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT---ATG-AATCCAC 46812
| || || || || || | || |||||| ||| || | || | ||| ||| ||||||
Sbjct 2610 CGACCGCAGCAAAGGCAATAATTCTCTCACCGAAATTAGC-TGATTTCGATGAAATCCAA 2552
Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 46872
| |||||||||||||| || ||| ||||| || || || ||||| || |||
Sbjct 2551 GAGAGCGCCCAATCAGCCTTGCGTTTAACAGCGGGCATGGTCTCAATTGCATTGAAAAGA 2492
Query 46873 AAGT 46876
|||
Sbjct 2491 TAGT 2488
Score = 120 bits (132), Expect = 4e-22
Identities = 191/274 (70%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949
|||| | | ||| || || ||||||| ||||||||||| || || | ||||| || ||
Sbjct 2406 ATCTCTTATATAGGTGTCGATTAAAACGCTATACATTTCGGAGTGCACATTTTCCATGGC 2347
Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009
|| || || || || || || | ||| ||||| | || || ||| | || || ||
Sbjct 2346 AATTTGGAAGCCATAGAAGCAACGTGCCTCAGTCACTTGAACTTCTTGGCTGAAACGCTC 2287
Query 47010 AGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAAT 47069
|||||| |||||||| || ||||| ||||||||| || ||||| || || ||
Sbjct 2286 GACCAAATTTTCATTCACAATGCCATCGGAAGCAGCAAAGAAAGCCAACACGTGCGATAT 2227
Query 47070 AAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTAC 47129
|||| || | ||| || ||| ||| || | | || || || | ||||||
Sbjct 2226 GAAATGACGCTCGTTATCAGTAAGCTTAGCCCAATCTGTCAAGTCCTTCGACAGATCTAC 2167
Query 47130 TTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163
||| ||| ||||||||||||| |||||||| |||
Sbjct 2166 TTCCTCAACTGTCCAGAATGATGCCTCTGCCTTT 2133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712760862855360
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