Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq1420 84.2 1e-11 >seq1420 Length=85926 Score = 84.2 bits (92), Expect = 1e-11 Identities = 108/148 (73%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 1264 GCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCT 1322 ||||| || | |||||||| || || |||||||| | ||||||||||| ||||| ||| Sbjct 4056 GCTGCCAGCTTTACCAGCGAAGTGCAGACATGTTTTTAGGTGTGCCGTTTAATATTGCCA 3997 Query 1323 CGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGA 1382 || || | | | |||||| | || ||||| | ||| |||||||| | | Sbjct 3996 GCTATGCATTATTAACACACATGGTTGCACAGCAAACTAATTTGCAAGTGGGTGACTTTA 3937 Query 1383 TCTGGACCGGCGGCGACTGCCACATCTA 1410 ||||||| || |||||||||||||| || Sbjct 3936 TCTGGACTGGTGGCGACTGCCACATTTA 3909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296060920015173