Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq1420 109 2e-19
>seq1420
Length=85926
Score = 109 bits (120), Expect = 2e-19
Identities = 289/430 (67%), Gaps = 16/430 (4%)
Strand=Plus/Minus
Query 51915 GGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGT 51974
||||||| |||||||| |||||||||||| | || | | || ||| | ||||||
Sbjct 4309 GGCGTCACTATTTGGGATGAATGGGCGGATACGCAAGGCGATTTAGGCCCTATTTATGGT 4250
Query 51975 AAGCAGTGGCGTAGTTGGG--ATGCTGG-TGG-CGGCAAGGTCATCGATCAGATCCATGA 52030
||| ||||| |||||| | || | ||| ||||| |||||||| || |||
Sbjct 4249 GTGCAATGGCGCAGTTGGCCAACGCCAGATGGTCGGCAT----ATCGATCAAATTACTGA 4194
Query 52031 AGTCGTCAAATCAATTAAGAACGATCCTGATAGTCGACGGCACATT-GTCTCTGCTTGGA 52089
||| | ||| | || | | |||||| |||| || || || |||||||
Sbjct 4193 AGTAATTAAAACCATACGCGAAAACCCTGATTCAAGACG-CATGTTAGTGAGCGCTTGGA 4135
Query 52090 ATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATG 52149
|||| | ||||| | ||||||||| || || ||| || |||| || || || |
Sbjct 4134 ATGTTTCACAACTGGATCAAATGGCGTTGATGCCATGTCATGCATTATTTCAGTTTTACG 4075
Query 52150 TAGCTGAAGGTAAGCTTTCG--TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGG 52207
| ||| | || ||| || ||||| | || ||||| ||| |||||||| || ||
Sbjct 4074 TTGCTAATGG--AGCGTTAAGCTGCCAGCTTTACCAGCGAAGTGCAGACATGTTTTTAGG 4017
Query 52208 CGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGG 52267
|| |||||||| |||||||||||| | || | || || || |||| | ||||
Sbjct 4016 TGTGCCGTTTAATATTGCCAGCTATGCATTATTAACACACATGGTTGCAC-AGCAAACTA 3958
Query 52268 CCTTG-ATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATG 52326
||| | || ||||| || || ||||||||||||||| ||| || || | || |||
Sbjct 3957 ATTTGCAAGTGGGTGACTTTATCTGGACTGGTGGCGACTGCCACATTTATGAAAATCATA 3898
Query 52327 TAGATCAGGT 52336
||||| ||
Sbjct 3897 GCGATCAAGT 3888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190052041844530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |