Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq2253 100 4e-16
seq6703 95.1 2e-14
>seq2253
Length=163492
Score = 100 bits (110), Expect = 4e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 165784 CAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 165843
|||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 120672 CAGTAGCTCATCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTAACAGGTTCGAGTCCT 120731
Query 165844 GTCTG 165848
|||||
Sbjct 120732 GTCTG 120736
>seq6703
Length=82049
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807
|||||| |||||||||| |||||||||| ||||||||||| | ||||||||||||||
Sbjct 37569 TTCCTCGATAGCTCAGTTGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAG 37628
Query 19808 CCCAGGTGGAGGAGC 19822
||||||| |||||||
Sbjct 37629 CCCAGGTCGAGGAGC 37643
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806
||||| |||||||||| |||||||||| ||||||||||| | |||||||||||||
Sbjct 37691 ATTCCCTGATAGCTCAGTTGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 37750
Query 19807 GCCCAGGTGGAGGAGC 19822
|||||||| | |||||
Sbjct 37751 GCCCAGGTCGGGGAGC 37766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 621918980288760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |