Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq6538 91.5 2e-13
seq2253 82.4 9e-11
>seq6538
Length=3451
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 17858 AGGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGA 17916
|||||||||||||||||||| |||||||||||| ||||| |||||| |||| |||||||
Sbjct 3178 AGGGGAATTAGCTCAGTTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGA 3237
Query 17917 GTCCGCTATTCTCCA 17931
||| |||||||||
Sbjct 3238 CTCCCTTATTCTCCA 3252
>seq2253
Length=163492
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 157424 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAATCCA 157483
|||||||||| ||||||||||||||||||||||||||||| ||| | ||||||| |||
Sbjct 120672 CAGTAGCTCATCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTAACAGGTTCGAGTCCT 120731
Query 157484 GCCTGAGACGCCA 157496
| ||| | ||||
Sbjct 120732 GTCTGGCAGGCCA 120744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596162051373680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |