Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq6538 91.5 2e-13 seq2253 82.4 9e-11 >seq6538 Length=3451 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 17858 AGGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGA 17916 |||||||||||||||||||| |||||||||||| ||||| |||||| |||| ||||||| Sbjct 3178 AGGGGAATTAGCTCAGTTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGA 3237 Query 17917 GTCCGCTATTCTCCA 17931 ||| ||||||||| Sbjct 3238 CTCCCTTATTCTCCA 3252 >seq2253 Length=163492 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 157424 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAATCCA 157483 |||||||||| ||||||||||||||||||||||||||||| ||| | ||||||| ||| Sbjct 120672 CAGTAGCTCATCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTAACAGGTTCGAGTCCT 120731 Query 157484 GCCTGAGACGCCA 157496 | ||| | |||| Sbjct 120732 GTCTGGCAGGCCA 120744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596162051373680