Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq489 192 1e-43 seq17788 176 9e-39 seq3386 152 1e-31 seq18258 95.1 3e-14 seq13721 95.1 3e-14 seq10726 95.1 3e-14 seq6484 95.1 3e-14 seq6039 95.1 3e-14 seq6010 95.1 3e-14 seq5906 95.1 3e-14 seq5001 95.1 3e-14 seq3864 95.1 3e-14 seq2300 95.1 3e-14 seq1133 95.1 3e-14 >seq489 Length=77466 Score = 192 bits (212), Expect = 1e-43 Identities = 184/236 (78%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || ||||||| ||| | || || ||||| ||||||||||| | Sbjct 4393 ACCACCACGCAGACGGAGTACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGA 4452 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || ||||| || ||||||||||||| ||| |||||||| || Sbjct 4453 AAGTGTGCGTCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGG 4512 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||| ||||| |||||||| || || || | ||||| ||||| |||| || || Sbjct 4513 AATGCCCTCTTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAAC 4572 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATAT 283107 || | || || |||||||| || | ||| || |||||||||||||||||| ||| Sbjct 4573 CTCCAAGGTAATGGTCTTACCGGTGAGAGTTTTGACGAATATCTGCATTTTCGTAT 4628 >seq17788 Length=7208 Score = 176 bits (194), Expect = 9e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| | |||| ||| || || |||||| ||||| || || |||| Sbjct 2424 CCACCACGAAGGCGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGAG 2365 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || ||||| || | ||||| || |||||||| | ||||||||| || ||| Sbjct 2364 AGTGTTCGACCATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGA 2305 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || ||||| || ||||| ||||| || | |||||||||||||||| |||||| Sbjct 2304 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGACC 2245 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| ||||||||||| | || ||||| || |||||||| || Sbjct 2244 TCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCATGTT 2195 >seq3386 Length=122896 Score = 152 bits (168), Expect = 1e-31 Identities = 330/490 (67%), Gaps = 23/490 (5%) Strand=Plus/Plus Query 301318 AAATTTATGTTCATCACCGGCGGCGTTTCAAGTTCATTGGGGAAAGGCCTCGCTGCTGCG 301377 |||||| | ||| |||| |||||||| | ||||| || |||||| | ||||| || Sbjct 57243 AAATTTGTCTTCGTCACAGGCGGCGTCGTATCCTCATTAGGTAAAGGCATTGCTGCCGCA 57302 Query 301378 AGTATCGCCAGTTTACTAGAGAGGCGATGCTTAAAGATAGCGATGCTTAAAATGGACCCC 301437 | ||| | || || ||| ||||||| || | | |||| | ||||| Sbjct 57303 TCCTTGGCCGCAATTCTTGAATCGCGTGGCTTAAAAGTAACCCTTATTAAGCTCGACCCA 57362 Query 301438 TATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTCGTGACG 301497 ||||||||||||||||| || || || || ||||||||| ||||| || || || Sbjct 57363 TATATCAACGTCGATCCTGGCACAATATCTCCCTTTCAACATGGTGAAGTTTTTGTAACC 57422 Query 301498 GATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCACTTCATTAACC 301557 |||||||| || ||||| ||| | |||||||| ||||| || || || | || ||| Sbjct 57423 GATGATGGCGCAGAAACTGATTTAGATCTGGGCCACTATGAGCGCTTTA--TC-GAAACG 57479 Query 301558 CTTAAGCGTGAA---AGTAATTTTACGACTGGCCAAGTTTATTTAAAAGTTATCGAAAAT 301614 | | |||| || | ||| |||||| |||| | | || | ||| |||| || Sbjct 57480 CGCATGCGTCAAACGAATAACTTTACGGCTGGGCGTATCTACCAATCAGTGCTCGAGAAG 57539 Query 301615 GAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACATCACCGATGAA 301674 |||||| |||| || | || || || || || ||| |||| ||||| ||| | ||| Sbjct 57540 GAACGCCGTGGTAAATACTTGGGTAAAACCGTACAGGTTATTCCACACATTACCAACGAA 57599 Query 301675 ATCAAAAGAAGA-ATTCACATTGCGGCTG--------AAAAATCA-------GATATACT 301718 ||| ||||| | ||| | || |||| | | |||| ||| | Sbjct 57600 ATC-CAAGAATATATTAAACGTGGTGCTGGCGTTGGAACAGATCATGCCGTTGATGTTGC 57658 Query 301719 TATTGGAGAAATTGGAGGAACGGTCGGAGATATCGAATCGCTTCCTTTTATAGAAGCGAT 301778 |||| |||| |||| || ||||| || ||||| ||||| ||||||||| ||||||| | Sbjct 57659 CATTGCAGAAGTTGGTGGTACGGTTGGCGATATTGAATCACTTCCTTTTTTAGAAGCTGT 57718 Query 301779 TCGTCAACTC 301788 ||||||||| Sbjct 57719 GCGTCAACTC 57728 >seq18258 Length=2218 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 294 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 350 >seq13721 Length=14796 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 3090 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3034 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 11877 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 11821 >seq10726 Length=2358 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 739 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 795 >seq6484 Length=17301 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 3117 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3173 >seq6039 Length=17770 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 7996 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 7940 >seq6010 Length=23151 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 9235 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 9291 >seq5906 Length=4660 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 700 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 644 >seq5001 Length=39483 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1386 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1442 >seq3864 Length=45110 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 22338 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 22394 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 22777 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 22721 >seq2300 Length=28033 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 5122 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 5066 >seq1133 Length=8192 Score = 95.1 bits (104), Expect = 3e-14 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 538 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046478040859342