Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq489 192 1e-43
seq17788 176 9e-39
seq3386 152 1e-31
seq18258 95.1 3e-14
seq13721 95.1 3e-14
seq10726 95.1 3e-14
seq6484 95.1 3e-14
seq6039 95.1 3e-14
seq6010 95.1 3e-14
seq5906 95.1 3e-14
seq5001 95.1 3e-14
seq3864 95.1 3e-14
seq2300 95.1 3e-14
seq1133 95.1 3e-14
>seq489
Length=77466
Score = 192 bits (212), Expect = 1e-43
Identities = 184/236 (78%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || ||||||| ||| | || || ||||| ||||||||||| |
Sbjct 4393 ACCACCACGCAGACGGAGTACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGA 4452
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| ||||| || ||||| || ||||||||||||| ||| |||||||| ||
Sbjct 4453 AAGTGTGCGTCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGG 4512
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||| ||||| |||||||| || || || | ||||| ||||| |||| || ||
Sbjct 4513 AATGCCCTCTTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAAC 4572
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATAT 283107
|| | || || |||||||| || | ||| || |||||||||||||||||| |||
Sbjct 4573 CTCCAAGGTAATGGTCTTACCGGTGAGAGTTTTGACGAATATCTGCATTTTCGTAT 4628
>seq17788
Length=7208
Score = 176 bits (194), Expect = 9e-39
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| ||||| | |||| ||| || || |||||| ||||| || || ||||
Sbjct 2424 CCACCACGAAGGCGCAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGAG 2365
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || ||||| || | ||||| || |||||||| | ||||||||| || |||
Sbjct 2364 AGTGTTCGACCATCTTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGA 2305
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || || ||||| || ||||| ||||| || | |||||||||||||||| ||||||
Sbjct 2304 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGACC 2245
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| |||||||| ||||||||||| | || ||||| || |||||||| ||
Sbjct 2244 TCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACAAAAATCTGCATGTT 2195
>seq3386
Length=122896
Score = 152 bits (168), Expect = 1e-31
Identities = 330/490 (67%), Gaps = 23/490 (5%)
Strand=Plus/Plus
Query 301318 AAATTTATGTTCATCACCGGCGGCGTTTCAAGTTCATTGGGGAAAGGCCTCGCTGCTGCG 301377
|||||| | ||| |||| |||||||| | ||||| || |||||| | ||||| ||
Sbjct 57243 AAATTTGTCTTCGTCACAGGCGGCGTCGTATCCTCATTAGGTAAAGGCATTGCTGCCGCA 57302
Query 301378 AGTATCGCCAGTTTACTAGAGAGGCGATGCTTAAAGATAGCGATGCTTAAAATGGACCCC 301437
| ||| | || || ||| ||||||| || | | |||| | |||||
Sbjct 57303 TCCTTGGCCGCAATTCTTGAATCGCGTGGCTTAAAAGTAACCCTTATTAAGCTCGACCCA 57362
Query 301438 TATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTCGTGACG 301497
||||||||||||||||| || || || || ||||||||| ||||| || || ||
Sbjct 57363 TATATCAACGTCGATCCTGGCACAATATCTCCCTTTCAACATGGTGAAGTTTTTGTAACC 57422
Query 301498 GATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCACTTCATTAACC 301557
|||||||| || ||||| ||| | |||||||| ||||| || || || | || |||
Sbjct 57423 GATGATGGCGCAGAAACTGATTTAGATCTGGGCCACTATGAGCGCTTTA--TC-GAAACG 57479
Query 301558 CTTAAGCGTGAA---AGTAATTTTACGACTGGCCAAGTTTATTTAAAAGTTATCGAAAAT 301614
| | |||| || | ||| |||||| |||| | | || | ||| |||| ||
Sbjct 57480 CGCATGCGTCAAACGAATAACTTTACGGCTGGGCGTATCTACCAATCAGTGCTCGAGAAG 57539
Query 301615 GAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACATCACCGATGAA 301674
|||||| |||| || | || || || || || ||| |||| ||||| ||| | |||
Sbjct 57540 GAACGCCGTGGTAAATACTTGGGTAAAACCGTACAGGTTATTCCACACATTACCAACGAA 57599
Query 301675 ATCAAAAGAAGA-ATTCACATTGCGGCTG--------AAAAATCA-------GATATACT 301718
||| ||||| | ||| | || |||| | | |||| ||| |
Sbjct 57600 ATC-CAAGAATATATTAAACGTGGTGCTGGCGTTGGAACAGATCATGCCGTTGATGTTGC 57658
Query 301719 TATTGGAGAAATTGGAGGAACGGTCGGAGATATCGAATCGCTTCCTTTTATAGAAGCGAT 301778
|||| |||| |||| || ||||| || ||||| ||||| ||||||||| ||||||| |
Sbjct 57659 CATTGCAGAAGTTGGTGGTACGGTTGGCGATATTGAATCACTTCCTTTTTTAGAAGCTGT 57718
Query 301779 TCGTCAACTC 301788
|||||||||
Sbjct 57719 GCGTCAACTC 57728
>seq18258
Length=2218
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 294 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 350
>seq13721
Length=14796
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 3090 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3034
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 11877 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 11821
>seq10726
Length=2358
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 739 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 795
>seq6484
Length=17301
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 3117 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 3173
>seq6039
Length=17770
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 7996 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 7940
>seq6010
Length=23151
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 9235 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 9291
>seq5906
Length=4660
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 700 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 644
>seq5001
Length=39483
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1386 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1442
>seq3864
Length=45110
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 22338 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 22394
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 22777 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 22721
>seq2300
Length=28033
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 5122 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 5066
>seq1133
Length=8192
Score = 95.1 bits (104), Expect = 3e-14
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 538 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046478040859342
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |