Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq489 113 3e-20
seq17788 93.3 3e-14
>seq489
Length=77466
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
||||||||| |||||||| |||| ||| ||| | || ||||| ||||| ||||||||
Sbjct 4429 CTCCTTTTGAATGTTGTAGTCGGAAAGTGTGCGTCCATCTTCCAGTTGCTTGCCGGCAAA 4488
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| |||||| || |||| || | || || || ||| ||||| ||| | |
Sbjct 4489 GATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTAGCCTTGACATT 4548
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | | || ||||||| ||||| ||||| || ||||| || || ||
Sbjct 4549 CTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGTCTTACCGGTGAGAGTTTTGAC 4608
Query 44326 GAAGATTTGCAT 44337
||| || |||||
Sbjct 4609 GAATATCTGCAT 4620
>seq17788
Length=7208
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|| || ||||| || ||||| | |||| || | || |||| ||| || || ||||||
Sbjct 2388 TCTTTCTGGATATTATAATCAGAGAGTGTTCGACCATCTTCCAACTGTTTGCCAGCAAAG 2329
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|| | ||| || ||||||| ||| | ||||| || ||| ||||| || | ||
Sbjct 2328 ATTAGACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTT 2269
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
| || ||||| | | ||| ||||| | || || ||||| ||||||||||| || ||
Sbjct 2268 TCGATAGTGTCCGAAGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACA 2209
Query 44327 AAGATTTGCATGATGT 44342
|| || |||||| |||
Sbjct 2208 AAAATCTGCATGTTGT 2193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359904964490841
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |