Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq183 111 2e-19 >seq183 Length=738700 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || |||||||| |||| ||||||||||| |||| || || || || |||||| Sbjct 171073 ATGTATGTATCAATGAGTAGGGAATACATTTCTGAATGTACATTTTCCATTGCAATCTGA 171014 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || |||||||| |||| || || | || |||||| || | | || | ||| |||| Sbjct 171013 AAGCCATAGAAACATCTGGCTTCTGTTACTTGTACCTCTTGGGAGAACCTTTCAACCAGA 170954 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 || ||||| || || || || ||||||||| || ||||||| ||||||||||| Sbjct 170953 TTTTCATTGACTATGCCATCTGATGCAGCAAAGAAAGCCAATACATGCTTAATGAA 170898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511367426587360