Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq246 87.8 3e-12 >seq246 Length=440471 Score = 87.8 bits (96), Expect = 3e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 189428 AAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGA 189487 |||| ||||| ||||| | ||||||| |||| ||||| || | || ||||||||| Sbjct 389614 AAAGGTGAAACGCATGACGATTTATGGAATTCGTCTCAAATACAATTAGTTAGAGAAGGA 389673 Query 189488 AAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACA 189547 || |||| | || | |||||||| |||||||||||||| || || |||||| || Sbjct 389674 AAGTTGCACGGCTTCCTTCGAATGTACTGGGCTAAGAAGATTCTAGAGTGGACTTCAAGC 389733 Query 189548 CCTGAAGACGC 189558 || ||||| || Sbjct 389734 CCCGAAGAAGC 389744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923112004373920