Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq326 217 2e-51 seq53 120 3e-22 seq299 114 1e-20 seq6726 111 2e-19 seq361 111 2e-19 seq6728 109 6e-19 seq143 109 6e-19 seq225 107 2e-18 seq689 105 8e-18 seq148 105 8e-18 seq554 104 3e-17 seq335 104 3e-17 seq229 102 9e-17 seq774 100 3e-16 seq55 96.9 4e-15 seq34 95.1 1e-14 seq429 86.0 7e-12 >seq326 Length=503882 Score = 217 bits (240), Expect = 2e-51 Identities = 797/1231 (65%), Gaps = 53/1231 (4%) Strand=Plus/Plus Query 96463 GGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGACAAGGTGCCC 96522 || ||||| ||||| |||||||| || || | | |||| ||||| |||| | || Sbjct 280460 GGTGCTTACTTTGTTGAATGGGGAGTTTATCCTAGAAAGTATCCCGTGGACCGTATACCA 280519 Query 96523 ATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAGGCGACGGTATC 96582 || || ||| | || ||||| |||||||||||||| || ||||| || || || || ||| Sbjct 280520 ATCCCGAATTTAACTCATCTTTTGTACGGTTTTATCCCGATTTGTGGTGGTGATGGAATC 280579 Query 96583 AACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCGGC 96642 ||||||||| | ||| | | || ||| | || ||||| | ||| || ||| Sbjct 280580 AACGACAGTTTGAAAGAAATTGAGGGAAGTTTCCAAGCGTTACAGAGATCTTGCAGTGGC 280639 Query 96643 AGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAAAA 96702 |||| || || || || ||| |||||| | | ||| |||||||||| |||||| Sbjct 280640 CGAGAAGACTTTAAAGTATCCATTCACGACCCCTGGGCTGCCTTACAAAAACCACAAAAA 280699 Query 96703 GGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGCTAT-TCG 96761 || |||| | |||||||| ||| ||||| ||||||||| | ||| || | Sbjct 280700 GGACTTTCTTCCTGGAATGAACCATACAAAGGCAACTTTGGCCAGTTGATGTCTTTAAAA 280759 Query 96762 CAAACATAACCCTCATTTAAAAATTTTGCCTAGCATCGGTGGTTGGACACTGAGCGACCC 96821 ||| || | ||| || |||| ||| | ||| || || |||||||| || || || Sbjct 280760 CAAGCA-AGACCTGATCTAAAGATTCTTCCTTCTATTGGCGGTTGGACCCTCGCTGATCC 280818 Query 96822 TTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTT-GTGGACTCGGTTCGTGAAT 96880 |||| || |||| ||| | |||| | | ||| | ||||| || || | Sbjct 280819 ATTCTTCTTCTTCGATGAC-AAGGTAAAGAGAGCGCGTTTCATTGACTCTGTAAAAGACT 280877 Query 96881 TCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTTTCCCGGCGGAA 96940 || | ||| ||||| ||||||||||| |||||||| |||||||| || || || || | Sbjct 280878 TCCTTCAAACCTGGAAATTTTTCGATGGTGTAGACATAGACTGGGAATTCCCTGGAGGTA 280937 Query 96941 AGGGTGCCAACCCCGAC-GTAGGCGATCCTAGCGTGGATGGAAACACATATGTAACACTA 96999 |||| | ||| |||||| | || | ||||| |||||| | ||||| | || Sbjct 280938 AGGGCG-CAAACCCGACACTTGGTGGTCCTA---AGGATGGTGAAGTCTATGTTTTATTA 280993 Query 97000 TTGAAAGAACTACGCCTAATGCTAGACAAACT------GGGTGTGGTGAACAAACGCGTG 97053 |||| || || || |||||| || || | | ||| || || | Sbjct 280994 ATGAAGGAGCTTCGAGAAATGCTTAACGAATTATCCAATGAAATGGGCAAGAA------G 281047 Query 97054 TACGAGTTGACCAGCGCCGTGGGAGCAGGCTACGATAAAATAGACGTGATAGATTACTCT 97113 ||||| || || || | | || || | || ||||| | || |||| ||| Sbjct 281048 TACGAATTAACATCAGCTATTAGTGCTGGATGGGACAAAATCCAAGTTGTAGACTACAAA 281107 Query 97114 TCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTCAAAGGCGCATGG 97173 | || | || |||| ||| | ||| | ||||| |||||||| || || || ||| Sbjct 281108 GCTGCGCAGAATTACATGGACCATATTTTTGTTATGAGCTACGACTTTAAGGGTGCTTGG 281167 Query 97174 TCCAACACGGAT---TTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAACCCTGAC 97230 ||||| ||| || ||||||||||| || |||| || || ||||||| | | Sbjct 281168 TCCAA---TGATACATTAGGTCATCAAACCGCACTGTATGCTCCCGAGTGGAACTCAAAG 281224 Query 97231 GACAAGTACACAACTGACTATGCCGTAAAAGAACT----GCTCAAGCAAAAAGTACCTTC 97286 || | || || || |||| | || | | || ||||||| || ||| | Sbjct 281225 GAAACTTATACCACAGACTTCGGTGTTCAGTACCTATTGGCTCAAGGTGTAA--ACC--C 281280 Query 97287 CAACAAAATTGTAGTTGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGATTA 97346 || |||||||| || || || || ||||| || | ||||||| || || ||| |||| Sbjct 281281 GAAGAAAATTGTCGTAGGTGTTGCAATGTATGGACGTGGGTGGACCGGAGTACACAATTA 281340 Query 97347 CAAGAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGTACATGGGAAAA 97406 | | ||| || ||||| |||| ||||| || || || |||||| | | Sbjct 281341 TACAGATGGTAATCCTTTCACGGGGATCGCAACAGGACCTTGCAAGGGCACATGGCAGGA 281400 Query 97407 CGGTGTCGTCGATTATAGGCAAGTT---AACG--ATT-TTAAAAACAGTCCCGCTTACAC 97460 ||||| |||||||| ||| || || || | ||| | |||||| | | Sbjct 281401 TGGTGTGGTCGATTACAGGGAAATTGCAAATGGCATTGCTCAAAACA-----AATGGGAG 281455 Query 97461 TTACGCTTACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGAAGAGGCGTT 97520 || | | ||||| || || ||| | || | || || | | ||| | ||| Sbjct 281456 TTCCAC-TACGATAACGTTGCCCAAGCTGCTTATGTGTTCAAACCATC--TACAGG---- 281508 Query 97521 GGATCTGATTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTTACA 97580 ||| || || | |||||| || || || || | ||||| | ||||| | | Sbjct 281509 GGAACTTGTTACATACGACAACGCGAGATCCGTTACCGAGAAAGGTAAATACGTAAGAAA 281568 Query 97581 GAATAATTTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGACAATGGCGATTTGTTAAA 97640 |||| | ||||||||||||| || ||||||||||| || || || || || | || || Sbjct 281569 GAATTACCTAGGTGGTTTGTTCGCGTGGGAAATAGACGCAGATAACGGTGACATATTGAA 281628 Query 97641 CGCCATGAACACAGGTCTGGGCAACAGCCCT 97671 ||| ||||||| | ||| || ||||| ||| Sbjct 281629 CGCAATGAACATGGCTCTAGGTAACAGTCCT 281659 >seq53 Length=2198565 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||| ||||| | ||| | ||| |||||||||||| ||||| || | Sbjct 1830757 TCCTCCTCTGAGACGTAACACAAGATGAAGTGTTGACTCCTTTTGAATGTTGTAGTCTGA 1830698 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || | |||||| ||||| || ||||| || |||||||| | || Sbjct 1830697 AAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGCTGGTCTGGTGG 1830638 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||||||| |||||| ||| | | | | ||||| | ||| || Sbjct 1830637 AATACCTTCCTTGTCCTGGATTTTAGCTTTAACATTTTCAATGGTGTCTGAAGGTTCAAC 1830578 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || | ||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct 1830577 TTCTAATGTGATGGTTTTTCCCGTAAGAGTTTTTACGAAGATCTGCATTTT 1830527 Score = 105 bits (116), Expect = 8e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| ||||| | ||| | ||| ||||||||||| ||||| || | Sbjct 1830985 TCCTCCCCTGAGACGTAACACAAGATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCTGA 1830926 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || | |||||| ||||| || ||||| || |||||||| | || Sbjct 1830925 AAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGCTGGTCTGGTGG 1830866 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | | |||||||| ||| |||| | ||||| | | | ||||| | ||||| Sbjct 1830865 AATACCTTCCTTGTCT-TGAATTTTAGCTTTGACATTTTCAATGGTGTCAGAGGCTTCCA 1830807 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | |||||||||||||| || || || || || || ||||||||| Sbjct 1830806 CTTCTAGGGTGATGGTTTTGCCTGTGAGTGTTTTAACGAAAATTTGCATT 1830757 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 42952 ATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAAT 43011 |||| || ||||| | ||| | || | |||||| || ||||||||||| ||||| | Sbjct 1831216 ATTG-CCACCTCTCAGACGGAGTACAAGATGCAAGGTTGATTCCTTTTGAATGTTGTAGT 1831158 Query 43012 CAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGG 43071 | | ||| || || | || || | ||||| |||||||| || || || |||||||| | Sbjct 1831157 CTGACAGCGTTCGGCCATCTTCCAATTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAG 1831098 Query 43072 CCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATT 43131 || | | |||||||| |||||| ||| | | | | ||||| | || Sbjct 1831097 GTGGAATACCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTGTCTGAAGGTT 1831038 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || || | ||||||||||| || || || || || ||||| ||||||||| Sbjct 1831037 CAACCTCCAATGTGATGGTTTTTCCTGTCAGTGTTTTAACAAAAATTTGCATT 1830985 >seq299 Length=1166076 Score = 114 bits (126), Expect = 1e-20 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| || |||| |||| ||||||||||||| ||||||||||||||||||||| | Sbjct 728461 ATAAAAAAGTTACTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 728520 Query 60114 TACTCACCACTATACTACCGAGGATT 60139 |||| ||||||||||||||||||||| Sbjct 728521 TACTGACCACTATACTACCGAGGATT 728546 >seq6726 Length=1105856 Score = 111 bits (122), Expect = 2e-19 Identities = 75/84 (89%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 77325 AAAAGTAATCTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 77266 Query 60117 TCACCACTATACTACCGAGGATTG 60140 | |||||||||||||||||||||| Sbjct 77265 TTACCACTATACTACCGAGGATTG 77242 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 76466 TCTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 76407 Query 60125 ATACTACCGAGGATT 60139 ||||||||||||||| Sbjct 76406 ATACTACCGAGGATT 76392 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 105237 CTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 105296 Query 60126 TACTACCGAGGATT 60139 |||||||||||||| Sbjct 105297 TACTACCGAGGATT 105310 >seq361 Length=515654 Score = 111 bits (122), Expect = 2e-19 Identities = 90/107 (84%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 60036 AACAACAAATTAACGTTTATGAAAAATT--TTCTCCTCGGCAGGGAATCGAACCCTGGTC 60093 || || ||||||| || | |||| || | |||| |||| ||||||||||||| |||| Sbjct 445894 AAAAATAAATTAAAATTAA--AAAAGTTCGTCCTCCACGGCGGGGAATCGAACCCCGGTC 445837 Query 60094 TCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 60140 ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 445836 TCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGATTG 445790 >seq6728 Length=204246 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 200488 CTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 200547 Query 60126 TACTACCGAGGATTG 60140 ||||||||||||||| Sbjct 200548 TACTACCGAGGATTG 200562 >seq143 Length=532421 Score = 109 bits (120), Expect = 6e-19 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 86373 CTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 86432 Query 60126 TACTACCGAGGATTGAAT 60143 ||||||||||||||| || Sbjct 86433 TACTACCGAGGATTGTAT 86450 >seq225 Length=846181 Score = 107 bits (118), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 60053 TATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||| ||||| | ||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 303267 TATAAAAAACT--CTCCTCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 303210 Query 60113 ATACTCACCACTATACTACCGAGGAT 60138 ||||| ||||||||||||||| |||| Sbjct 303209 ATACTAACCACTATACTACCGGGGAT 303184 >seq689 Length=113138 Score = 105 bits (116), Expect = 8e-18 Identities = 80/92 (87%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 60054 ATGAAAAATT-TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 || |||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 1517 ATAAAAAATAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 1458 Query 60113 ATACTCACCACTATACTACCGAGGAT-TGAAT 60143 ||||| |||||||||||||||| ||| ||||| Sbjct 1457 ATACTGACCACTATACTACCGAAGATGTGAAT 1426 >seq148 Length=1369482 Score = 105 bits (116), Expect = 8e-18 Identities = 74/83 (89%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 60057 AAAAATT-TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 549504 AAAAATGATTCTCCGCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 549563 Query 60116 CTCACCACTATACTACCGAGGAT 60138 || ||||||||||||||| |||| Sbjct 549564 CTTACCACTATACTACCGCGGAT 549586 Score = 98.7 bits (108), Expect = 1e-15 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 445952 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 446011 Query 60131 CCGAGGATT 60139 |||| |||| Sbjct 446012 CCGAAGATT 446020 >seq554 Length=358752 Score = 104 bits (114), Expect = 3e-17 Identities = 74/84 (88%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||| | Sbjct 218120 ATAAAAAATTCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 218063 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||||||| || Sbjct 218062 TACTGACCACTATACTACCGAAGA 218039 >seq335 Length=783708 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 |||| |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 409723 AAATAATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTT 409782 Query 60119 ACCACTATACTACCGAGGATTG 60140 |||||||||||||||| ||||| Sbjct 409783 ACCACTATACTACCGAAGATTG 409804 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 332231 AAAAATAATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 332290 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 332291 TTACCACTATACTACCGAAGA 332311 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 332039 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 331980 Query 60124 TATACTACCGAGGA 60137 ||||||||||| || Sbjct 331979 TATACTACCGAAGA 331966 Score = 98.7 bits (108), Expect = 1e-15 Identities = 70/79 (89%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 410370 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 410429 Query 60125 ATACTACCGAGGAT-TGAA 60142 |||||||||| ||| |||| Sbjct 410430 ATACTACCGAAGATGTGAA 410448 >seq229 Length=252579 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 194907 AAAAAGGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 194966 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 194967 TGACCACTATACTACCGAAGA 194987 >seq774 Length=60200 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 40691 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 40632 Query 60124 TATACTACCGAGGAT 60138 ||||||||||| ||| Sbjct 40631 TATACTACCGAAGAT 40617 >seq55 Length=1115010 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 675473 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 675532 Query 60125 ATACTACCGAGGA 60137 |||||||||| || Sbjct 675533 ATACTACCGAAGA 675545 >seq34 Length=952033 Score = 95.1 bits (104), Expect = 1e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 306939 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 306880 Query 60131 CCGAGGA-TTGA 60141 |||| || |||| Sbjct 306879 CCGAAGACTTGA 306868 >seq429 Length=186180 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 ||||||||| || | ||| ||||| || || || || || | ||| || ||| | || Sbjct 15698 CAACACCAAGTGTAGTGTAGATTCCTTCTGGATGTTATAGTCGGACAGGGTACGCCCATC 15639 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || || || ||||||||||| || | ||||| ||||| | || | | |||||| || Sbjct 15638 TTCAAGTTGTTTACCAGCGAAAATCAAACGCTGTTGGTCAGGTGGGATTCCCTCCTTATC 15579 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | ||| || || | | | | |||||| | ||||| || | |||||||| Sbjct 15578 CTGGATCTTGGCCTTCACATTTTCGATAGTGTCGGAGGCCTCCACCTCTAGGGTGATGGT 15519 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGCCGAA 43195 || ||||| || || || |||||||| ||||| ||| || ||| Sbjct 15518 CTTACCCGTGAGGGTTTTCACAAAGATCTGCATGTTTCAGCTGAA 15474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571765078553440