Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1173 98.7 8e-16 >seq1173 Length=128733 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 20353 GACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCT 20412 ||||||||||| | | || |||||||| | ||| | | |||||| || || Sbjct 62812 GACAGAAGAATATTAATGTGTTCCTGGAACCCATCTGATCTTGATAAAATGGCATTACCA 62753 Query 20413 CCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTA 20471 || || ||| || ||| || ||| | || |||||| || || | || |||| | |||| Sbjct 62752 CCTTGCCATTGTCT-TGCTCAGTTTCATGTAGCTAATGATAAACTCTCCTGTCTATTGTA 62694 Query 20472 TCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCT 20531 |||| || |||||||||||||| ||||| ||||| |||||||| |||||||| | | Sbjct 62693 TCAAAGAAGTGCTGATATGGGACTTGGTGTACCTTTTAATATTGCCAGTTATGCCATATT 62634 Query 20532 TACGTATATGATTGCACA 20549 || ||||||| || || Sbjct 62633 GACACATATGATAGCTCA 62616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399148251575860