Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6726 87.8 3e-12 >seq6726 Length=1105856 Score = 87.8 bits (96), Expect = 3e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 126971 GTCTTTGGTAGAGTGCAAACTCTAGAGTGGTGGCCTGGTGCATTGCGGTGGCGATCGCTG 127030 ||| |||||| || |||||| | ||| ||||| | |||||| |||||||| |||| Sbjct 762495 GTCGTTGGTAATCGGCGAACTCTGGTAAGGTAGCCTGTTTCATTGCCGTGGCGATAGCTG 762436 Query 127031 CAATCGTGTGATTGTGCGGTCCACCTTGCAGGCCAGGAAACACGGC 127076 |||||| || || |||||||||||||| || ||||| ||||| || Sbjct 762435 CAATCGCGTTGTTATGCGGTCCACCTTGAAGTCCAGGGAACACCGC 762390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740991133712480