Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq191 98.7 5e-16 >seq191 Length=1024003 Score = 98.7 bits (108), Expect = 5e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAG-GGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTT 3960 |||||||| || ||| |||||||||||||| || ||||| ||||| ||| | | || | Sbjct 63558 GGGTTCTCTGT-GAGTGGTCAAGAAAATATTCAGGAAATATTATCAAAACAATTATACCT 63616 Query 3961 GTGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATT 4020 || || ||| | || |||||| | | | | ||||||||||| |||| | ||||| Sbjct 63617 ATGCCAGTGTCTTGCAGCCTTGATGTTGGTGAGGACTGGTGGTCATTTTGTTGTGAAATT 63676 Query 4021 TTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTT 4078 || ||| | |||||| ||||||| |||| | | ||| | ||||| |||| |||| Sbjct 63677 ATTTGATGTTTTTACAAAATTTAGTGTTGGTCTTATTTATATTATGTACAGATGTTTT 63734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276528833588044