Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_006645.1 Length=21388 Score E Sequences producing significant alignments: (Bits) Value seq129 113 6e-21 >seq129 Length=3256488 Score = 113 bits (124), Expect = 6e-21 Identities = 115/146 (79%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 4502 GGAATGAGCTTATATCTTTAAAAATGTCAATAATTCACAAGATACAA-GGTCATTTCTTA 4560 ||||||||||| ||| |||||| | | || || |||| || ||| || |||| | | Sbjct 2603459 GGAATGAGCTTGTATAGTTAAAACA-TAATTAGTTAACAATATGCAATGGGCATTCTTCA 2603517 Query 4561 ATTATTGACATTTTTAAAGATATAAGCTCATCCTGATGTTATACTCATCAAGAGTTTTCA 4620 || ||| ||| ||| | |||||||| | | ||||| |||||||||||||||| |||| Sbjct 2603518 ATAATT-ACAATTTCGTAAATATAAGCCCGTTCTGATATTATACTCATCAAGAGCTTTCT 2603576 Query 4621 TTTGAGTACCCACATGCATTTTTGAT 4646 |||||||||| ||||||||||||||| Sbjct 2603577 TTTGAGTACCAACATGCATTTTTGAT 2603602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 68317395175524