Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_006655.1 Length=15279 Score E Sequences producing significant alignments: (Bits) Value seq633 695 0.0 seq2884 284 1e-72 seq145 190 2e-44 >seq633 Length=131030 Score = 695 bits (770), Expect = 0.0 Identities = 659/836 (79%), Gaps = 14/836 (2%) Strand=Plus/Plus Query 4314 TCTGCAGACAGACCGATAGCTGCACAAAACTCTACGATC------CACCAGACGCATTCT 4367 ||||||| || |||| ||||| |||||||||||| | |||||||||||||| Sbjct 129560 TCTGCAGTTAGGCCGACAGCTGACCAAAACTCTACGTTAACGAATCACCAGACGCATTCG 129619 Query 4368 AAAGTTATATTGGAGCAGCAAATGTTAGATAACTTTGCTACACTCTTAACTCAAATGGGA 4427 | | |||| || |||||||||||||| || ||||||||| ||||| | | |||||| Sbjct 129620 AGATTTATTTTAGAGCAGCAAATGTTGGACTACTTTGCTATCCTCTTTATTGGAATGGGC 129679 Query 4428 TCTACTTTGCGTTATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGATACT 4487 |||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||| | Sbjct 129680 TCTACTTTGCGTCATACGACTGATATGTACAACACCTTACGGAGTTCAATCCTCGATATT 129739 Query 4488 GCCCAAACATATAAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAG-TGCA--AAAA 4544 || | ||||||| ||| || |||||| | || ||| |||| ||| ||| ||| ||| Sbjct 129740 ACCGAGACATATAGAAAGTTTTTGGGTTCCGTAGAACAATTTAACACAGCTGCGGGAAAC 129799 Query 4545 TTAGCCAGCAATTCATCTTCTTCAAGCAACCGAACAGAAGAAGTCTCACAGTTGTCTGAA 4604 ||| |||| | ||| |||| |||||| |||| |||| |||| || ||||| Sbjct 129800 ACAGCTAGCAGCGCCTCTCCTTCGAGCAACTTAACACGTGAAGGTTCACGGTCACCTGAA 129859 Query 4605 GAAAGACACATTGAAGTAGCAGCGAGTACTAGTTCTAGTACTCAGAATCAACATAGTCGT 4664 |||| ||||| ||||||| | |||||| | ||||||||| ||| |||||||||| | Sbjct 129860 GAAACACACACTGAAGTAACTGCGAGTGCCAGTTCTAGTTATCAAGATCAACATAGAATT 129919 Query 4665 GGTGATGCTAACAGAACGCCGAAAATAAAATAC---AACTCATGGCGTCTTGTTCTACCA 4721 | || |||||||| ||||| || || ||| || || | | || | ||||||||| Sbjct 129920 GATGTTGCTAACAAAACGCTGATAAAGAAAAACGAAAAGTTGTACCGGGTCGTTCTACCA 129979 Query 4722 CCGGAATATGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACAAATCTGCCAGGA 4781 |||||||||||| || |||||| ||||||||||||||| ||| || ||| |||||| || Sbjct 129980 CCGGAATATGATGCTGATGATACAAGATGGACATTGAAGAATCAAAAAAAACTGCCAAGA 130039 Query 4782 CTCGTAGAACTTACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACTGT 4841 ||||| ||||||| ||| ||||||||||||||||||||| | || ||||||| ||||| Sbjct 130040 CTCGTTGAACTTATGCCCCAAAGTGGTGTTTACGTCAGCCCCAGAAACCTCAATAACTGT 130099 Query 4842 CAGCAAGTATCAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAGCAGTATTTAAC 4901 ||||||||||| ||||||||| |||| ||||| |||||||| ||| ||| || | | Sbjct 130100 CAGCAAGTATCGAAAGATTGCAAATCTTTAGCTCGTAGATTATTACCAGAAGTCTTCAGC 130159 Query 4902 AGAAAAGCACTAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCACCTGATAATGTT 4961 ||||| ||||| |||||||||| ||| ||||||||| | || || || |||||| Sbjct 130160 AGAAATGCACTGAGTGTTTGTTCATCATTGACTGAGACATGGCTTGCTTCTAATAATG-A 130218 Query 4962 GTATCTAATAT-AAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGTTAAATTTCGT 5020 |||||| | | ||||||||||||||| | |||||||| |||||||||||||||| || Sbjct 130219 GTATCTTCTCTGTAGGCCAGAATTAGATAAGCATGCGTGTTCGGTACTGTTAAATTTTGT 130278 Query 5021 TTTAGAGCACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACTTT 5080 ||| ||| | ||| ||| | |||||||||||||||||||||||||||||||||| | || Sbjct 130279 TTTTGAGTATGGAATCCGATGTGGTTGGAATACTGATCTACAACCTATCCTCAGAGCCTT 130338 Query 5081 ACATTGTAAGATTCAAGAGATTCGGTTCAAATACGGTGTAGTGGTTCAATGCTAAC 5136 ||| || |||| ||| |||||||||||||||| |||||| ||||| |||| |||| Sbjct 130339 ACACAGTGAGATACAAAAGATTCGGTTCAAATATGGTGTAATGGTTGAATGTTAAC 130394 Score = 659 bits (730), Expect = 0.0 Identities = 647/833 (78%), Gaps = 29/833 (3%) Strand=Plus/Minus Query 4314 TCTGCAGACAGACCGATAGCTGCACAAAACTCTACG------ATCCACCAGACGCATTCT 4367 |||||||| | || | ||||| |||||||||||| | ||||||||| |||| Sbjct 97908 TCTGCAGATCGGCCAACAGCTGACCAAAACTCTACGTCAACGAATCACCAGACGGATTCG 97849 Query 4368 AAAGTTATATTGGAGCAGCAAATGTTAGATAACTTTGCTACACTCTTAACTCAAATGGGA 4427 | | |||| || |||||||||||||| || ||||||| || ||||| ||| |||||| Sbjct 97848 AGATTTATTTTAGAGCAGCAAATGTTGGACAACTTTGGTAGCCTCTTTACTGAAATGGAC 97789 Query 4428 TCTACTTTGCGTTATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGATACT 4487 |||||||||||| || | |||||||||||||||| | | || ||||||||||||||| | Sbjct 97788 TCTACTTTGCGTCATGCGACTGATATGTACAACATCTTCCGGTGTTCAATCCTCGATAGT 97729 Query 4488 GCCCAAACATATAAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAG-TGCA--AAAA 4544 ||| ||||||||||||| ||||||||| | || ||| |||| ||| ||| ||| ||| Sbjct 97728 GCCGAAACATATAAAAAGTTATTGGGTTCCGTAGAACAATTTAACACAGCTGCGGGAAAC 97669 Query 4545 TTAGCCAGCAATTCATCTTCTTCAAGCAACCGAACAGAAGAAGTCTCACAGTTGTCTGAA 4604 ||| |||| | ||| |||| |||||| |||| |||| |||| || ||||| Sbjct 97668 ACAGCTAGCAGCGCCTCTCCTTCGAGCAACTTAACACGTGAAGGTTCACGGTCACCTGAA 97609 Query 4605 GAAAGACACATTGAAGTAGCAGCGAGTACTAGTTCTAGTACTCAGAATCAACATAGTCGT 4664 |||| ||||| ||||||| | |||||| | ||||||||| ||| ||||||||| | Sbjct 97608 GAAACACACACTGAAGTAACTGCGAGTGCCAGTTCTAGTTGTCAAGATCAACATAAAATT 97549 Query 4665 GGTGATGCTAACAGAACGCCGAAAATAAAATACAACTCATGGCGTCTTGTTCTACCACCG 4724 | || |||| ||| | | | ||| || | |||||||||||| Sbjct 97548 GATGTTGCTCACAAAGAGTTG---------TAC---------CGGTTCGTTCTACCACCG 97507 Query 4725 GAATATGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACAAATCTGCCAGGACTC 4784 ||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 97506 GAATATGATGCTGATGATACAAGATGGACATTGAAGTATCGAACAAATCTGCCAGGACTT 97447 Query 4785 GTAGAACTTACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACTGTCAG 4844 |||||||||| ||| ||||| ||||||| |||||||| ||||||||||| ||||| || Sbjct 97446 GTAGAACTTATGCCCCAAAGCGGTGTTTTCGTCAGCTCTGGAGACCTCAATCACTGTAAG 97387 Query 4845 CAAGTATCAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAGCAGTATTTAACAGA 4904 || ||||| ||||||||| |||||||||| ||||||| ||| ||| || | |||| Sbjct 97386 CATGTATCGAAAGATTGCAAATCATTAGCTGTTACATTATTACCAGAAGTCTTCAGCAGA 97327 Query 4905 AAAGCACTAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCACCTGATAATGTTGTA 4964 || ||||| ||||||||||| ||||||||||||| | ||||| | ||||| || Sbjct 97326 AATGCACTGAGTGTTTGTTTATCAATGACTGAGACACAACAGGCTTATAATAAT-AAGTG 97268 Query 4965 TCTAATAT-AAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGTTAAATTTCGTTTT 5023 ||| | | ||||||||||||||| | |||||||| || ||||||||||||| |||| Sbjct 97267 TCTTCTCTGTAGGCCAGAATTAGATAAGCATGCGTGTTCGATACTGTTAAATTTTGTTTG 97208 Query 5024 AGAGCACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACTTTACA 5083 ||||| || ||| |||||||||||||||||||||| ||||||||||||| | ||||| Sbjct 97207 TGAGCATGGGATCCGACGTGGTTGGAATACTGATCTAGAACCTATCCTCAGAATCTTACA 97148 Query 5084 TTGTAAGATTCAAGAGATTCGGTTCAAATACGGTGTAGTGGTTCAATGCTAAC 5136 ||||||| |||||||||||||||||||| |||||| ||||| |||| |||| Sbjct 97147 CTGTAAGACGCAAGAGATTCGGTTCAAATATGGTGTATTGGTTAAATGTTAAC 97095 Score = 587 bits (650), Expect = 7e-164 Identities = 558/711 (78%), Gaps = 23/711 (3%) Strand=Plus/Plus Query 4430 TACTTTGCGTTATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGATACTGC 4489 |||||||||| |||| |||||||||||||||||| |||| |||||||||||||||| ||| Sbjct 104241 TACTTTGCGTCATACGACTGATATGTACAACACCTTACGGAGTTCAATCCTCGATAGTGC 104300 Query 4490 CCAAACATATAAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAG-TGCAAAAATTA- 4547 | ||||||||||||| ||||||||| | |||||| |||| || ||| ||| | || | Sbjct 104301 CGAAACATATAAAAAGTTATTGGGTTCCGTCGAACAATTTAAAACAGCTGCGAGAAACAA 104360 Query 4548 -GCCAGCAATTCATCTTCTTCAAGCAACCGAACAGAAGAAGTCTCACAGTTGTCTGAAGA 4606 || |||| | ||| |||| |||||| |||| | |||| |||| || |||||| Sbjct 104361 AGCTAGCAGCGCCTCTCCTTCGAGCAACTTAACACATGAAGGTTCACGGTCACCTGAAGC 104420 Query 4607 AAGACACATTGAAGTAGCAGCGAGTACTAGTTCTAGTACTCAGAATCAACATAGTCGTGG 4666 || ||||| ||||||| |||||||| ||| |||||||| ||| |||||||||| || Sbjct 104421 AACACACACTGAAGTAACAGCGAGTGCTACTTCTAGTAATCAAGATCAACATAGAAATGA 104480 Query 4667 TGATGCTAACAGAACGCCGAAAATAAAATACAACTCATGGCGTCTTGTTCTACCACCGGA 4726 || || | ||| || | | ||| || | |||| ||||||||| Sbjct 104481 TGTTGGTGACAAAATGTTG---------TAC---------CGGTTCGTTCCACCACCGGA 104522 Query 4727 ATATGATCCTCGTGATACCAGATGGACATTGAAGTATCGAACAAATCTGCCAGGACTCGT 4786 ||||||| || |||||| || |||||||||||||||| |||||||| |||||||||||| Sbjct 104523 ATATGATGCTGATGATACAAGGTGGACATTGAAGTATCCAACAAATCGGCCAGGACTCGT 104582 Query 4787 AGAACTTACGCCTCAAAGTGGTGTTTACGTCAGCTACGGAGACCTCAAATACTGTCAGCA 4846 |||||||| ||| |||||| ||||||||||||||| ||||||||| | |||||| |||| Sbjct 104583 AGAACTTATGCCCCAAAGTAGTGTTTACGTCAGCTCCGGAGACCTTTATTACTGTAAGCA 104642 Query 4847 AGTATCAAAAGATTGCCAATCATTAGCGAAGCGATTATTATCAGCAGTATTTAACAGAAA 4906 ||||| ||||||||| |||||||||| |||||||| || ||| || || || Sbjct 104643 TGTATCGAAAGATTGCAAATCATTAGCTCTTAGATTATTACCACAAGTCTTCCGCAAAAC 104702 Query 4907 AGCACTAAGTGTTTGTTTCTCAATGACTGAGAAAGCGCAGGCACCTGATAATGTTGTATC 4966 ||||| |||||||||| ||||||||||||| | || || || |||||| ||||| Sbjct 104703 TGCACTGAGTGTTTGTTCATCAATGACTGAGACATGGCTTGCTTCTAATAATG-AGTATC 104761 Query 4967 TAATAT-AAGGCCAGAATTAGATGATAATGCGTGTACGGTACTGTTAAATTTCGTTTTAG 5025 | | | ||||||||||||||| | ||||||| |||||||||||||||| |||||| Sbjct 104762 TTCTCTGTAGGCCAGAATTAGATAAGCGTGCGTGTTCGGTACTGTTAAATTTTGTTTTAA 104821 Query 5026 AGCACGGACTCCAACGTGGTTGGAATACTGATCTACAACCTATCCTCAGTACTTTACATT 5085 | || ||| ||| |||||||||||||||||||||| ||||||||||||| | ||||| Sbjct 104822 AACATGGAATCCTACGTGGTTGGAATACTGATCTAGAACCTATCCTCAGAGCCTTACACA 104881 Query 5086 GTAAGATTCAAGAGATTCGGTTCAAATACGGTGTAGTGGTTCAATGCTAAC 5136 ||||||| |||||||||||||||||||| |||||| ||||| ||| |||| Sbjct 104882 GTAAGATGCAAGAGATTCGGTTCAAATATGGTGTATTGGTTGTATGTTAAC 104932 Score = 322 bits (356), Expect = 5e-84 Identities = 406/553 (73%), Gaps = 29/553 (5%) Strand=Plus/Plus Query 712 TTTTTACGTGTTTCAGATGATTCGTAGAAGGGACAATAATAAGCGAGCATTCTATGTTGT 771 ||||| |||||||||||| ||| ||| || |||| ||| ||||||||||||||| Sbjct 102540 TTTTTGATTGTTTCAGATGACACGTGAAAGTGA---TAATGAGCCAGCATTCTATGTTGT 102596 Query 772 TCAATTCCTAGAATTGCCTTTTGAAGGTATTGATGATTACGTATGCGTGCCGTACACTTG 831 ||||||||| || |||||||||| |||||||||||||||| |||||||||| || || Sbjct 102597 TCAATTCCTTGATGAGCCTTTTGAAAGTATTGATGATTACGTTTGCGTGCCGTGTACGTG 102656 Query 832 GCTGATAGTACGTAAAGCGACGGATCAGAAGTCTATTGTTGCGTACCCTAAAGGGGAAGA 891 ||||||||||| | || | | | | | |||||||||||||| || ||||| Sbjct 102657 GCTGATAGTACCTCCCTTGAAGAGTGACAGGGTCGTTGTTGCGTACCCTGAAAACGAAGA 102716 Query 892 TCCTTTTGTCACCAAAGATCGCGTCAAGAACAAGGAGAGATGCAATAACGAGTGGAGATT 951 ||||||| | || | ||||||||| |||| |||||||||||| |||| ||||||| ||| Sbjct 102717 TCCTTTTTTTACAAGAGATCGCGTGAAGAGGAAGGAGAGATGCGATAATGAGTGGAAATT 102776 Query 952 TTTTATGGCTGCGATCAAATATGAAACAGGTGAGTTTGAATCAATGTATTAGTTAATCGG 1011 || ||||||| | ||||| || || || || ||||| | | ||||||||||||||| | Sbjct 102777 TTATATGGCTACTGTCAAACATAAATCATGTAAGTTTAAGTAAATGTATTAGTTAATAGA 102836 Query 1012 TTGTGCGTAGTATTGTCGAAGTAAATTCGGATCTAGATCATCTCAGAAATTGAG-AGAAA 1070 |||||||| ||| | ||| || |||| ||| || |||| | ||||| || | || Sbjct 102837 TTGTGCGTTACATTATTGAAATATATTCAGATTCCGAAAATCTTATAAATTAAGAATTAA 102896 Query 1071 GTAA----TAtt--tttt---------tATNNTTTTCAGATAGTTACGGAGATGCAGAAT 1115 ||| |||| |||| | | ||||||||| |||| ||||||| | Sbjct 102897 TTAAATCTTATTAATTTTGATATATAATGTATTTTTCAGATTCTTACACAGATGCACAGA 102956 Query 1116 ATTGGATTGCGATGAGAAATGATAATGGACCTTCAGTAGAAAGAGAATTAAAAACAACAG 1175 |||||| || |||||||||||| ||||||||| || || ||||| || | ||||| Sbjct 102957 GTTGGATCGCTATGAGAAATGATTATGGACCTTTGGTTAAAGAAGAATCAAGAGTAACAG 103016 Query 1176 GTGAGAATTAAATCGCTTAA--ATAGTTCTAACGATCGAATTTTCATTGTAAATTTATTT 1233 |||||||| |||| || | || |||| || ||||||||| | ||||| |||| Sbjct 103017 GTGAGAATAAAATTATTTTATCATTGTTC--AC-----AATTTTCATAG-AAATTCATTT 103068 Query 1234 TCAGAAACCACTT 1246 || | || |||| Sbjct 103069 TCGAATACTACTT 103081 Score = 316 bits (350), Expect = 2e-82 Identities = 415/572 (73%), Gaps = 37/572 (6%) Strand=Plus/Plus Query 4216 ATCATGAAGTCACTTCAGATCAGGAGATGTCTGCAGATGAAGCACCTGTTGAAAGAACGA 4275 ||||||||| ||||||| || ||||||||||||||| |||| | || |||||| Sbjct 120330 ATCATGAAGAAGTTTCAGATTGCGACATGTCTGCAGATGAATCACCGTTCGAGAGAACGG 120389 Query 4276 ATAACTTTTACGGCCCTGG-AATCAGTTCTGGAAGTAGCTCTGCAGACAGACCGATAGCT 4334 | || |||| || ||| ||| | | || || | |||||||| || |||| |||| Sbjct 120390 ACAATGTTTATGGTACTGCTAATGA-TCCTAGACATGATTCTGCAGATAGGCCGACAGCT 120448 Query 4335 GCACAAAACTCTACGATCCACCAGACGCATTCTAAAGTTATATTGGAGCAGCAAATGTTA 4394 | |||||||||||| || || ||| |||| || |||||||||||||| Sbjct 120449 GACCAAAACTCTACG-TCAACGAGAT-----------TTATTTTAGAGCAGCAAATGTTG 120496 Query 4395 GATAACTTTGCTACACTCTTAACTCAAATGGGATCTACTTTGCGTTATACTACTGATATG 4454 || |||||||||| |||| ||| ||||||| |||||||||||| |||| | ||||||| Sbjct 120497 GACAACTTTGCTATCCTCTATACTGAAATGGGCTCTACTTTGCGTCATACGATTGATATG 120556 Query 4455 TACAACACCCTACGAAGTTCAATCCTCGATACTGCCCAAACATATAAAAAATTATTGGGT 4514 ||||||||| |||| |||||||||||||||| |||| ||||||| ||| || | | | Sbjct 120557 TACAACACCTTACGGAGTTCAATCCTCGATATTGCCACGACATATACAAAGTTTTATGTT 120616 Query 4515 GCAGTCGAAGAATTCAACTCAG-TGC--AAAAATTAGCCAGCAATTCATCTTCTTCAAGC 4571 | ||| || |||| ||| ||| ||| ||| ||| |||| | ||| |||| ||| Sbjct 120617 TCCGTCAAACAATTTAACACAGCTGCGGGAAACACAGCTAGCAGCGCCTCTCCTTCGAGC 120676 Query 4572 AACCGAACAGAAGAAGTCTCACAGTTGTCTGAAGAAAGACACATTGAAGTAGCAGCGAGT 4631 ||| |||| |||| |||| || ||||||||| | ||| ||||||| | |||||| Sbjct 120677 AACTTAACACGTGAAGGTTCACGGTCACCTGAAGAAACAAACACTGAAGTAACTGCGAGT 120736 Query 4632 ACTAGTTCTAGTACTCAGAATCAACATAGTCGTGGTGATGCTAACAGAACGCCGAAAATA 4691 | ||||||| ||| |||||||||| || || |||||||| || | | Sbjct 120737 --GACTTCTAGTTATCAAGATCAACATAGAATTGATGTTGCTAACAAAAAGTTG------ 120788 Query 4692 AAATACAACTCATGGCGTCTTGTTCTACCACCGGAATATGATCCTCGTGATACCAGATGG 4751 ||| || | |||| |||||||||||||||| || |||||| || ||| Sbjct 120789 ---TAC---------CGGTTCGTTCCACCACCGGAATATGATGCTGATGATACAAGGTGG 120836 Query 4752 ACATTGAAGTATCGAACAAATCTGCCAGGACT 4783 ||||||||||||| |||||||||||||||||| Sbjct 120837 ACATTGAAGTATCCAACAAATCTGCCAGGACT 120868 Score = 307 bits (340), Expect = 1e-79 Identities = 397/545 (73%), Gaps = 10/545 (2%) Strand=Plus/Plus Query 690 TAAGTTGGTATTTAAGGACGGGTTTTTACGTGTTTCAGATGATTCGTAGAAGGGACAATA 749 ||| ||| | |||| ||| | |||| | |||||||||||| | | |||||| || Sbjct 127782 TAAATTGATGTTTACGGAAGTTTTTTGAT-TGTTTCAGATGAGACCTGTAAGGGA---TA 127837 Query 750 ATAAGCGAGCATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTATTGATGATT 809 |||||| | |||||||||||| |||||| |||| || || |||||| |||||||||||| Sbjct 127838 ATAAGCCATTATTCTATGTTGTCCAATTCATAGATTTACCCTTTGAAAGTATTGATGATT 127897 Query 810 ACGTATGCGTGCCGTACACTTGGCTGATAGTACGTAAAGCGACGGATCAGAAGTCTATTG 869 |||||||||||||||| || ||||||||| ||| | | || | | | | | ||| Sbjct 127898 ACGTATGCGTGCCGTATACGTGGCTGATACTACCTCCATTGAAGAGTGACAGGGTCGTTG 127957 Query 870 TTGCGTACCCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAGAACAAGGAGA 929 ||||||||||||||| || ||||||||| || | ||||||||| |||| ||||| | Sbjct 127958 TTGCGTACCCTAAAGACGATGATCCTTTTAATACAAGAGATCGCGTGAAGAGGAAGGAAA 128017 Query 930 GATGCAATAACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACAGGTGAGTTTG 989 | | | || | ||||||||||||| ||||||| | ||||| || |||||||| ||||| Sbjct 128018 GGTACGATGATGAGTGGAGATTTTATATGGCTACTGTCAAACATAAAACAGGTAAGTTTA 128077 Query 990 AATCAATGTATTAGTTAATCGGTTGTGCGTAGTATTGTCGAAGTAAATTCGGATCTAGAT 1049 | | ||| || |||| || | |||||||| || | |||||| || ||| || Sbjct 128078 AGTAAATTTACTAGTAAACAGATTGTGCGTTACATCATTGAAGTATATCGAGATTCCGAA 128137 Query 1050 CATCTCAGAAATTGAGAGAAAGTAATAtttttttATNNTTTTCAGATAGTTACGGAGATG 1109 ||| | | ||||| ||||| | ||||||| | ||| ||||||||| |||| |||| Sbjct 128138 CATTTTATAAATTAAGAGATAATAATATTGATATAT-TTTTTCAGATTCTTACAATGATG 128196 Query 1110 CAGAATATTGGATTGCGATGAGAAATGATAATGGACCTTCAGTAGAAAGAGAATTAAAAA 1169 || || |||||| || | || ||||||| | ||||||| || || || || || | Sbjct 128197 CACAAAGTTGGATCGCTACGAAAAATGATTACGGACCTTTGGTTAAAGAAGGATCAAGAG 128256 Query 1170 CAACAGGTGAGAATTAAATCGCTTAAATAGTTCTAACGATCGAATTTTCATTGTAAATTT 1229 ||||||| ||||| |||| || | ||| | | ||||||||| |||||| Sbjct 128257 TAACAGGTTAGAATCAAATTATTTTATCAGTGTT-----CCCAATTTTCATAGTAAATAC 128311 Query 1230 ATTTT 1234 ||||| Sbjct 128312 ATTTT 128316 Score = 262 bits (290), Expect = 4e-66 Identities = 325/443 (73%), Gaps = 23/443 (5%) Strand=Plus/Minus Query 688 AATAAGTTGGTATTTAAGGACGGGTTTTTACGTGTTTCAGATGATTCGTAGAAGGGACAA 747 ||| | ||| |||||| ||| | |||| | |||||||||| ||| || ||| || Sbjct 99609 AATTAATTGATATTTACGGAAGTCTTTTGA----TTTCAGATGACACGTGAAACGGATAA 99554 Query 748 TAATAAGCGAGCATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTATTGATGA 807 |||||||||||||||||||||| ||| |||||||||| |||||||||| Sbjct 99553 ---------AGCATTCTATGTTGTTCAATTCAAAGATAAGCCTTTTGAAAGTATTGATGA 99503 Query 808 TTACGTATGCGTGCCGTACACTTGGCTGATAGTACGTAAAGCGACGGATCA---GAA--G 862 ||||| ||||||||||| || ||| |||||||| || || | ||| | | | | Sbjct 99502 ATACGTGTGCGTGCCGTATACGTGGATGATAGTAAGT----CGCCTGATGACTGGCATGG 99447 Query 863 TCTATTGTTGCGTACCCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAGAAC 922 || ||||||||||||||||| | ||||||||||||| || | ||||||||| |||| Sbjct 99446 TC-ATTGTTGCGTACCCTAATGAGGAAGATCCTTTTTATACAAGAGATCGCGTGAAGAGG 99388 Query 923 AAGGAGAGATGCAATAACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACAGGT 982 ||||||| ||||||| |||||| ||||| | | ||| | ||||| || || || || Sbjct 99387 GAGGAGAGGCGCAATAAAAAGTGGAAATTTTATTTTGCTACTGTCAAACATAAATCATGT 99328 Query 983 GAGTTTGAATCAATGTATTAGTTAATCGGTTGTGCGTAGTATTGTCGAAGTAAATTCGGA 1042 |||||| | | ||||||||||||||| | |||||||| || | ||| || |||| || Sbjct 99327 GAGTTTAAGTAAATGTATTAGTTAATAGATTGTGCGTTACATCATTGAAATATATTCAGA 99268 Query 1043 TCTAGATCATCTCAGAAATTGAGAGAAAGTAATAtttttttATNNTTTTCAGATAGTTAC 1102 | || |||| | ||||| ||||| | |||| || | ||| ||||||||| |||| Sbjct 99267 TTCCGAAAATCTTATAAATTAAGAGATAATAATTTTGATATATATTTTTCAGATTCTTAC 99208 Query 1103 GGAGATGCAGAATATTGGATTGC 1125 |||||| || |||||| || Sbjct 99207 AATGATGCACAAAGTTGGATCGC 99185 Score = 221 bits (244), Expect = 1e-53 Identities = 216/278 (78%), Gaps = 3/278 (1%) Strand=Plus/Minus Query 722 TTTCAGATGATTCGTAGAAGGGACAATAATAAGCGAGCATTCTATGTTGTTCAATTCCTA 781 |||||||||| ||| ||| || |||| ||| |||||||||||||||||||||| | Sbjct 112752 TTTCAGATGACACGTGAAAGTGA---TAATGAGCCAGCATTCTATGTTGTTCAATTCATT 112696 Query 782 GAATTGCCTTTTGAAGGTATTGATGATTACGTATGCGTGCCGTACACTTGGCTGATAGTA 841 || |||||||||| |||||||||||||||||||||||||||| || ||||| |||||| Sbjct 112695 GATAAGCCTTTTGAAAGTATTGATGATTACGTATGCGTGCCGTATACGTGGCTAATAGTA 112636 Query 842 CGTAAAGCGACGGATCAGAAGTCTATTGTTGCGTACCCTAAAGGGGAAGATCCTTTTGTC 901 | | |||| || ||| |||||||||||||||||| ||||||||| || | Sbjct 112635 ATTCACTTGACGAATGGCAAGGTCGTTGTTGCGTACCCTAAAGACGAAGATCCTCTTTTT 112576 Query 902 ACCAAAGATCGCGTCAAGAACAAGGAGAGATGCAATAACGAGTGGAGATTTTTTATGGCT 961 || | ||||||||| |||| |||||||| | |||||| ||||||| ||| ||||||| Sbjct 112575 ACAAGAGATCGCGTGAAGAGGAAGGAGAGGTACAATAATGAGTGGAATCTTTATATGGCT 112516 Query 962 GCGATCAAATATGAAACAGGTGAGTTTGAATCAATGTA 999 | | ||| || || || || ||||| | | |||||| Sbjct 112515 ACTGTTAAACATAAATCATGTAAGTTTAAGTAAATGTA 112478 Score = 221 bits (244), Expect = 1e-53 Identities = 186/229 (81%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 4314 TCTGCAGACAGACCGATAGCTGCACAAAACTCTACG------ATCCACCAGACGCATTCT 4367 |||||||| || |||| ||||| |||||||||||| | |||||||||||||| Sbjct 129308 TCTGCAGATAGGCCGACAGCTGACCAAAACTCTACGTCAACGAATCACCAGACGCATTCG 129367 Query 4368 AAAGTTATATTGGAGCAGCAAATGTTAGATAACTTTGCTACACTCTTAACTCAAATGGGA 4427 | | |||| || |||||||||||||| || |||||||||| ||||| ||| ||||| Sbjct 129368 AGATTTATTTTAGAGCAGCAAATGTTGGACAACTTTGCTATCCTCTTTACTGGAATGGAC 129427 Query 4428 TCTACTTTGCGTTATACTACTGATATGTACAACACCCTACGAAGTTCAATCCTCGATACT 4487 |||||| ||||| |||| |||||||||||||| ||| |||| |||||||||||||||| | Sbjct 129428 TCTACTCTGCGTCATACGACTGATATGTACAATACCTTACGGAGTTCAATCCTCGATATT 129487 Query 4488 GCCCAAACATATAAAAAATTATTGGGTGCAGTCGAAGAATTCAACTCAG 4536 ||| | ||||||||||| ||| ||||| | |||||| |||| ||| ||| Sbjct 129488 GCCAAGACATATAAAAAGTTACTGGGTTCCGTCGAACAATTTAACACAG 129536 Score = 203 bits (224), Expect = 3e-48 Identities = 240/323 (74%), Gaps = 8/323 (2%) Strand=Plus/Plus Query 4216 ATCATGAAGTCACTTCAGATCAGGAGATGTCTGCAGATGAAGCACCTGTTGAAAGAACGA 4275 ||||||| | ||||||| || | ||||||||||||| ||||||| || |||||| Sbjct 128958 ATCATGAGGAAGTTTCAGATTGCGACAGGTCTGCAGATGAATCACCTGTCGAGAGAACGG 129017 Query 4276 ATAACTTTTACGGCCCTGG-AATCAGTTCTGGAAGTAGCTCTGCAGACAGACCGATAGCT 4334 | || |||| ||| ||| ||| | | || || | |||||||| || |||| |||| Sbjct 129018 ACAATGTTTATGGCACTGCTAATGA-TCCTAGACATGATTCTGCAGATAGGCCGACAGCT 129076 Query 4335 GCACAAAACTCTACG------ATCCACCAGACGCATTCTAAAGTTATATTGGAGCAGCAA 4388 | |||||||||||| | |||||||||||||| | | |||| || ||||||||| Sbjct 129077 GACCAAAACTCTACGTCAACGAATCACCAGACGCATTCGAGATTTATTTTAGAGCAGCAA 129136 Query 4389 ATGTTAGATAACTTTGCTACACTCTTAACTCAAATGGGATCTACTTTGCGTTATACTACT 4448 ||||| ||||||| || ||||| | ||||||| | ||| |||||| ||| || Sbjct 129137 ATGTTGCGCAACTTTGGTAGCCTCTTTAAAGAAATGGGCTATACATTGCGTCATAAGGCT 129196 Query 4449 GATATGTACAACACCCTACGAAGTTCAATCCTCGATACTGCCCAAACATATAAAAAATTA 4508 |||||| ||||||| || | ||||||||| |||||| |||| ||||||||||| ||| Sbjct 129197 AATATGTGCAACACCTTATGGAGTTCAATCTTCGATATTGCCATGACATATAAAAAGTTA 129256 Query 4509 TTGGGTGCAGTCGAAGAATTCAA 4531 ||| || |||||| |||| || Sbjct 129257 TTGAGTTTCGTCGAACAATTTAA 129279 Score = 181 bits (200), Expect = 1e-41 Identities = 179/233 (77%), Gaps = 15/233 (6%) Strand=Plus/Minus Query 4314 TCTGCAGACAGACCGATAGCTGCACAAAACTCTACG------ATCCACCAGACGCATTCT 4367 |||||||| || |||| ||||| |||||||||||| | |||||||||||||| Sbjct 98169 TCTGCAGATAGGCCGACAGCTGACCAAAACTCTACGTCAACGAATCACCAGACGCATTCG 98110 Query 4368 AAAGTTATATTG---------GAGCAGCAAATGTTAGATAACTTTGCTACACTCTTAACT 4418 | | |||| || |||||||||||||| || |||||||||| ||||| | | Sbjct 98109 AGATTTATTTTTAGCGAGAGAGAGCAGCAAATGTTGGACAACTTTGCTATCCTCTTTATT 98050 Query 4419 CAAATGGGATCTACTTTGCGTTATACTACTGATATGTACAACACCCTACGAAGTTCAATC 4478 ||||| | | |||||| ||| |||| |||||||||||| ||||| |||| ||||||||| Sbjct 98049 GAAATGCGCTATACTTTTCGTCATACGACTGATATGTACCACACCTTACGGAGTTCAATC 97990 Query 4479 CTCGATACTGCCCAAACATATAAAAAATTATTGGGTGCAGTCGAAGAATTCAA 4531 ||||||| | || | ||||||| ||| || |||||| | |||||| |||| || Sbjct 97989 CTCGATATTACCGAGACATATAGAAAGTTTTTGGGTTCCGTCGAACAATTTAA 97937 Score = 179 bits (198), Expect = 4e-41 Identities = 234/323 (72%), Gaps = 8/323 (2%) Strand=Plus/Minus Query 4216 ATCATGAAGTCACTTCAGATCAGGAGATGTCTGCAGATGAAGCACCTGTTGAAAGAACGA 4275 ||||||||| |||| ||| || | ||||||||||| ||||||| | | |||| Sbjct 98519 ATCATGAAGAAGTTTCAAATCGCGACAGAGCTGCAGATGAATCACCTGTCAAGACAACGG 98460 Query 4276 ATAACTTTTACGGCCCTGGAATCAGTTCTGGAAGTAGCTCTGCAGACAGACCGATAGCTG 4335 | || |||| || ||| | | | | | |||||||| | ||||||||||| Sbjct 98459 ACAATGTTTATGGGACTGCTAAGGATCTTAGCCATGATTCTGCAGATAAACCGATAGCTG 98400 Query 4336 CACAAAACTCTACGATC-------CACCAGACGCATTCTAAAGTTATATTGGAGCAGCAA 4388 |||||||||| ||| |||||||||||||| ||| |||| || ||||||||| Sbjct 98399 ACAAAAACTCTAC-ATCAACAAATCACCAGACGCATTCAAAATTTATTTTAGAGCAGCAA 98341 Query 4389 ATGTTAGATAACTTTGCTACACTCTTAACTCAAATGGGATCTACTTTGCGTTATACTACT 4448 ||||| || ||| | | || ||||| ||| |||| |||||| ||||| ||| ||| Sbjct 98340 ATGTTGGACAACATAGATATCCTCTTTACTGAAATTCTCTCTACTGTGCGTCATATGACT 98281 Query 4449 GATATGTACAACACCCTACGAAGTTCAATCCTCGATACTGCCCAAACATATAAAAAATTA 4508 ||||||||| ||| ||| |||| || ||||||| |||| ||| ||||||||| ||| Sbjct 98280 GATATGTACTGGACCTTACACAGTTTAAATCTCGATATTGCCGAAAAATATAAAAAGTTA 98221 Query 4509 TTGGGTGCAGTCGAAGAATTCAA 4531 |||||| | |||||| |||| || Sbjct 98220 TTGGGTTCCGTCGAACAATTTAA 98198 Score = 89.7 bits (98), Expect = 5e-14 Identities = 146/212 (69%), Gaps = 9/212 (4%) Strand=Plus/Plus Query 3734 AGAGCGTAACAATTACGAACAGCGACCTAACTCTCGGCCTATCAGAATGAGTACTCCATC 3793 |||| | |||| |||||| || ||||||| |||| ||||| ||||| |||||||| Sbjct 119623 AGAGGGCAACACTTACGATCATCGACCTACATCTCAAAATATCAATATGAGGACTCCATC 119682 Query 3794 TATCGGACAAAATTCAATTATCCCTTCCAGTCCGTTGTATCAGACCTCCAAGCTTCCACA 3853 |||||||||||| || ||| | || ||||||||| || | ||| |||| Sbjct 119683 AGATAGACAAAATTCAACACACCTTTCAAATCTAACGTATCAGACTCCCGAACTTGCACA 119742 Query 3854 ACAGAGACAGTCGCACCCATCTCAGCAAGACTCACAACGGCAACCACAGAAACCGAAAAT 3913 |||||||||| ||| ||| |||| || ||||| ||| ||| ||| | Sbjct 119743 ACAGAGACAGATGCAACCAAATCAGGTGGATTCACA---------GAAGAGACCAAAACT 119793 Query 3914 ACGTATTGGCACCTCTACCAAGCCACAAAACA 3945 ||||||| || ||||| || || |||||| Sbjct 119794 CCGTATTGTCAGCTCTAAAAATCCTAAAAACA 119825 >seq2884 Length=832 Score = 284 bits (314), Expect = 1e-72 Identities = 327/435 (75%), Gaps = 12/435 (3%) Strand=Plus/Plus Query 681 AATATCGAATAAGTTGGTATTTAAGGACGGGTTTTTACGTGTTTCAGATGATTCGTAGAA 740 ||||| ||| | ||||| |||| ||| | |||||| | |||||||||| |||| || Sbjct 409 AATATTAAATTAATTGGTGTTTACGGAAGTGTTTTTGATT-TTTCAGATGAGACGTAAAA 467 Query 741 GGGACAATAATAAGCGAGCATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTA 800 | | |||||||| || ||||||||||||||||||| |||| ||||||| || ||| Sbjct 468 GTGT---TAATAAGCCAGAATTCTATGTTGTTCAATTCAAAGAAAAGCCTTTTCAAAGTA 524 Query 801 TTGATGATTACGTATGCGTGCCGTACACTTGGCTGATAGTACGTAAAGCGACGGATCAGA 860 ||||||||||||||||||||||| || ||| |||||||| ||| ||| || | | Sbjct 525 TTGATGATTACGTATGCGTGCCGGGTACGTGGGTGATAGTAAGTACCTCGATAAATGACA 584 Query 861 A-GTCTATTGTTGCGTACCCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAG 919 | ||| |||||||| |||||||||| || ||||||||| || | ||||||||| ||| Sbjct 585 ACGTC-ATTGTTGCATACCCTAAAGACGATGATCCTTTTAATACAAGAGATCGCGTGAAG 643 Query 920 AACAAGGAGAGATGCAATAACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACA 979 | ||||| || | | || | ||||||||||||| | ||||| ||||| || ||||| Sbjct 644 AGGAAGGAAAGGTACGATGATGAGTGGAGATTTTATTTGGCTAATGTCAAACATAAAACA 703 Query 980 GGTGAGTTTGAATCAATGTATTAGTTAATCGGTTGTGCGTAGTATTGTCGAAGTAAATTC 1039 ||| ||||| | | ||||||||||||||| | |||||||| || | ||| || |||| Sbjct 704 GGTAAGTTTAAGTAAATGTATTAGTTAATAGATTGTGCGTTACATCATTGAAATATATTC 763 Query 1040 GGATCTAGATCATCTCAGAAATTGAGAGAAAGTAATAtttttttATNNTTTTCAGATAGT 1099 || | ||| ||| ||||| ||||| | |||| || | ||| ||||||||| | Sbjct 764 CGA---AAATCTTCT---AAATTAAGAGATAATAATTTTGATATATATTTTTCAGATTCT 817 Query 1100 TACGGAGATGCAGAA 1114 ||| |||||| || Sbjct 818 TACAATGATGCACAA 832 >seq145 Length=527597 Score = 190 bits (210), Expect = 2e-44 Identities = 230/313 (73%), Gaps = 15/313 (5%) Strand=Plus/Plus Query 694 TTGGTATTTAAGGACGGGTTTTTACGTGTTTCAGATGATTCGTAGAAGGGACAATAATAA 753 ||| | |||| | | | ||||| ||| |||||||| ||| |||| |||| Sbjct 386698 TTGATGTTTACGTAAGTGTTTTCGATTGTATCAGATGACACGTGAAAGG------AATA- 386750 Query 754 GCGAGCATTCTATGTTGTTCAATTCCTAGAATTGCCTTTTGAAGGTATTGATGATTACGT 813 ||||||||||||| ||||||||| ||||||| ||| |||||||||||||||| Sbjct 386751 --GAGCATTCTATGTAGTTCAATTCATAGAATT------TGATAGTATTGATGATTACGT 386802 Query 814 ATGCGTGCCGTACACTTGGCTGATAGTACGTAAAGCGACGGATCAGAAGTCTATTGTTGC 873 |||||| ||||| || |||||||||| || || |||| | || | | | |||||||| Sbjct 386803 ATGCGTACCGTATACGTGGCTGATAGCACAGAATGCGATGAATGACATGGTCATTGTTGC 386862 Query 874 GTACCCTAAAGGGGAAGATCCTTTTGTCACCAAAGATCGCGTCAAGAACAAGGAGAGATG 933 ||||||| ||| ||| ||||| || || | ||||||||| |||| |||||||||| Sbjct 386863 GTACCCTGAAGACGAACATCCTGTTCATACAAGAGATCGCGTGAAGAGGAAGGAGAGATA 386922 Query 934 CAATAACGAGTGGAGATTTTTTATGGCTGCGATCAAATATGAAACAGGTGAGTTTGAATC 993 || | | ||||||||||| | |||| | || |||| || ||||| ||||| | | Sbjct 386923 CAGTGATATGTGGAGATTTTATTCGGCTACTGTCTTATATAAATCAGGTAAGTTTAAGTA 386982 Query 994 AATGTATTAGTTA 1006 |||||| |||||| Sbjct 386983 AATGTACTAGTTA 386995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48770256066008