Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_008967.1 Length=3841 Score E Sequences producing significant alignments: (Bits) Value seq301 84.2 5e-13 >seq301 Length=710464 Score = 84.2 bits (92), Expect = 5e-13 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1784 ATCCTCATCAACACCGAGTCGCTGTTACCTGTGTTCGGCGGGATCATCTCTACAACAATG 1843 ||||||||||| || || |||||||| | || || ||| |||| | || | | Sbjct 412744 ATCCTCATCAATGTTGAATCTCTGTTACCGATTTTTGGTGGGGTCATGCCCGCAGCGTCG 412685 Query 1844 GACAAGTTTGCAAGCATATCGAAACTAGAAAACTTTGTCAGGATGCATGTTCATTTGAAT 1903 ||||||||||| ||| || |||| ||| | ||||||||| ||||||||||| | || Sbjct 412684 GACAAGTTTGCCAGCGTAGCGAAGATAGTAGACTTTGTCAAACTGCATGTTCATCTAAAC 412625 Query 1904 ATGTGTTCGGACCGTC 1919 ||||||| || | ||| Sbjct 412624 ATGTGTTTGGGCTGTC 412609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12178221172920