Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq578 82.4 6e-11 >seq578 Length=1472074 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||||||||||||||| || |||||||| ||| ||||||||| |||||||| |||| | Sbjct 657197 CCTCCTCTCAGCCGCAGTACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAC 657138 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCA 34000 | ||| | || || | ||||| || ||||| |||| Sbjct 657137 AGGGTGCGCCCATCTTCTAGCTGCTTACCAGCAAAAATCA 657098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397026841573096