Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq401 111 2e-19 >seq401 Length=384550 Score = 111 bits (122), Expect = 2e-19 Identities = 255/381 (67%), Gaps = 11/381 (3%) Strand=Plus/Plus Query 114275 aaaaTAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 114334 |||| ||| ||| || | |||||| ||||| | |||||||| | |||||||| || Sbjct 357497 AAAACGAATGTATCAGCCAAACCTTGAACACCAATCCCAATTGGTCTGTGTCTCATGTTT 357556 Query 114335 GACTTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 114393 || ||| ||| ||| | | ||||| ||||| ||| |||| | |||| ||||| Sbjct 357557 GAATTTTTAGCT-TCTGGAACTGGATAGTAATTCACATCAATAATTTTGTTTAAATTTTG 357615 Query 114394 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTC 114450 ||| | || |||| ||| | | |||||| |||| || ||| | |||| Sbjct 357616 GGTAATTGTTTTAGTGACTTCCTTTAACTTTTC------AAAATTGTAAGTTTTGTCTTC 357669 Query 114451 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 114510 ||||||| || | || || ||||| || | |||||| |||| ||||| | Sbjct 357670 ATTGACAAACATGTTGAGAGCTATTGATGCTAAATTACAGACAGCCACTTCATCTTCCGA 357729 Query 114511 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 114570 ||||| |||| |||||| || || | ||| || ||||| ||||| | ||| | ||| Sbjct 357730 GGTGTATTCTACAATTTCTGTGCAGAGATTGCTACATTTAATTGTGCCAAGGTTTTGTTG 357789 Query 114571 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 ||| ||| ||||||| | || || || ||||| |||| || || ||||| ||| Sbjct 357790 ATTGCTTTTTCTGTTACATGAGTCTTTATACAGCATAAATGGTGTTCCAGTCTCTACTTG 357849 Query 114631 GGACTTGAGAATAGCCTTCCA 114651 | || | ||||| ||||| Sbjct 357850 TGCCTCAATTATAGCTTTCCA 357870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597298733071840