Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq183 96.9 6e-15 >seq183 Length=738700 Score = 96.9 bits (106), Expect = 6e-15 Identities = 122/165 (74%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273 || |||||||||| || |||||||| || || ||||||||| |||||| || | || Sbjct 171052 GAATACATTTCTGAATGTACATTTTCCATTGCAATCTGAAAGCCATAGAAACATCTGGCT 170993 Query 160274 TCCAGATACT-GCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332 || | |||| | ||||| || | |||||||| | ||||||| |||| || | || || Sbjct 170992 TCT-GTTACTTGTACCTCTTGGGAGAACCTTTCAACCAGATTTTCATTGACTATGCCATC 170934 Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTC 160377 | || |||||||||||||| || || ||||| || ||||| Sbjct 170933 TGATGCAGCAAAGAAAGCCAATACATGCTTAATGAAGTGCCTCTC 170889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795082164994880