Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6 295 3e-74 seq92 188 3e-42 seq229 176 2e-38 seq135 161 4e-34 seq74 159 1e-33 seq53 136 2e-26 seq66 118 4e-21 seq429 109 2e-18 seq401 107 8e-18 seq578 104 9e-17 >seq6 Length=643904 Score = 295 bits (326), Expect = 3e-74 Identities = 542/782 (69%), Gaps = 33/782 (4%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 |||||||||||| | ||||| || | ||| ||||| || || | || ||||||||||| Sbjct 132951 ATTGGAATTGATTTAGGAACTACGTATTCTTGTGTTGGGGTGTGGCAGCATGGAAATGTA 133010 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || |||||||| ||||||||||| |||| || ||||| | ||| ||||| ||| Sbjct 133011 GATATTATAGCTAATGACCAAGGTAATAGAACGACACCTTCTTACGTAGCCTTTACAGAT 133070 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAAA--TCAA-TGG---TAAATTCAAATGCCAAA 451090 |||| |||| |||| | || || ||| |||| ||| | || ||| || Sbjct 133071 ACAGAGCGACTGATAGGTGATGCAGCGAAAAATCAAGTGGCCCTTAACCCAA--GC---- 133124 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||||| | | ||| || ||||| |||||||||| | | || ||| | | ||| Sbjct 133125 AACACCATTTTTGACGCAAAACGCCTAATTGGCCGCAAATTCGACGATCCAAAGATTCAA 133184 Query 451151 AAAGAGAAAAA--ATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATAT 451206 |||| | || ||| | |||| | ||| ||||| | ||| |||||| | | Sbjct 133185 CAAGATATTAAGCATTGGCCTTTCAAA----GTAATAAATGACGCAGGTAAGCCCAAACT 133240 Query 451207 TCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 |||||||| ||| |||||| | || |||| |||||||||||||||||| ||||| Sbjct 133241 TCAAGTAACTTACAAAGGTCAGACGAAAAAGTTTGCTCCTGAAGAAATTAGTAGCATGGT 133300 Query 451267 TCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326 ||||| ||||||||||||| || || | || | || | |||| | | |||||| Sbjct 133301 TCTTATAAAAATGAAAGAAATCGCTCAAAACTACCTCGGGACATCAGTGAATAGTGCAGT 133360 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 || || || || || ||||| ||||| | || ||||||| ||||||||||| || Sbjct 133361 GATAACAGTCCCTGCCTATTTTAATGACTCGCAGAGGCAAGCCACTAAAGATGCTGGTGC 133420 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 |||||||||| |||| |||||||| |||||||| |||||||| || |||||| | ||||| Sbjct 133421 TATTGCTGGTCTAAACGTTCTTCGTATTATTAACGAACCTACCGCCGCTGCTTTGGCATA 133480 Query 451447 TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 ||| ||| || ||| || | || |||||| | || |||||||||| || || Sbjct 133481 TGGGTTAGATAA---AAACTTAAAGGGTGAGAAAAATGTCCTAATATTTGATTTAGGCGG 133537 Query 451507 AGGAACTCATGATACTTCTGTACTTTCAAT---TGAAGATGGGGTATTTGAAGTAAAGGC 451563 || ||| |||| |||| ||||| | || ||||| | | ||||| || || || Sbjct 133538 CGGTACTTTTGATGTTTCTATACTTACTATCGATGAAGGTTCTCTCTTTGAGGTTAAAGC 133597 Query 451564 AACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTT 451623 || || || ||||| | || || |||||| |||||| | | |||| ||| || Sbjct 133598 TACTGCAGGCGACACTCACTTGGGTGGAGAAGATTTTGATAGTAGACTTGT-TAAT--TT 133654 Query 451624 GAAAACTGATG---TTCAACGAAAACTAAAAGTAGATATTTCTACTAACCAAAAAGCACT 451680 | |||||| || || |||||| ||| |||| | ||||||| ||||| || Sbjct 133655 CTTAGCTGATGAATTTAAAAGAAAACACAAAAAAGATTTACGAACTAACCCTAAAGC-CT 133713 Query 451681 TA 451682 || Sbjct 133714 TA 133715 >seq92 Length=1326259 Score = 188 bits (208), Expect = 3e-42 Identities = 258/360 (72%), Gaps = 8/360 (2%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| ||||||||||| ||| ||||||| || ||||| ||||| ||||| || ||| Sbjct 161816 TTTGCACCTGAAGAAATCTCAGCTATGGTGCTGACTAAGATGAAGGAAACTGCTGAAGCT 161875 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| |||| ||||| | || || | ||||| ||||| || ||||| || || Sbjct 161876 TATCTTGGCAAGAAGGTTACCCACGCTGTCGTAACTGTACCCGCCTACTTCAACGACGCT 161935 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 ||||| ||||| ||||||||||| ||| |||||||| | || || | |||| ||| Sbjct 161936 CAACGTCAAGCGACTAAAGATGCTGGAGTAATTGCTGGCCTCAACGTCATGAGAATAATT 161995 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGa 451476 || || ||||| || ||||| | || || || || | | |||||| | | ||| Sbjct 161996 AACGAGCCTACCGCTGCTGCAATTGCCTACGGTCTCG-------ACAAGAAAGACGGAGA 162048 Query 451477 aaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT 451536 ||| ||| | | ||||||||||| ||||| || || |||| || | || | || Sbjct 162049 AAAGAATGTGCTTGTATTTGATTTAGGTGGTGGTACATTTGATGTCTCACTTCTGACCAT 162108 Query 451537 TGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 ||| | || || ||||||||| |||||||||||||| ||||| | ||||||||||| Sbjct 162109 TGACAACGGCGTGTTTGAAGTAGTTGCAACCAATGGTGACACTCACTTGGGAGGTGAAGA 162168 >seq229 Length=252579 Score = 176 bits (194), Expect = 2e-38 Identities = 355/524 (68%), Gaps = 7/524 (1%) Strand=Plus/Minus Query 451086 CCAAA-AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACT 451144 ||||| |||||||||| || || |||||| | || || |||| || |||||||| | Sbjct 12911 CCAAAGAACACAGTATTCGACGCAAAACGTCTCATCGGACGTAGGTTTGATGATGCAAAA 12852 Query 451145 GTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTAT 451204 |||||| |||| ||| | | | ||| ||| | | | |||||||| | Sbjct 12851 GTACAACAAGACCTTAAACATTGGCCATTTGAAGTAATCTCTGATGGCGGAAAGCCTAAG 12792 Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 ||| || | || |||||| | | |||| ||| |||| || ||||| || |||||| Sbjct 12791 ATTGTTGTCGAGTACAAAGGTCAGAAGAAAAAGTTTTCTCCAGAGGAAATATCTTCTATG 12732 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||| || ||||||||||| ||||| ||| ||| | || | |||| |||| Sbjct 12731 GTTCTGACAAAAATGAAAGACACAGCTGAAACTTATCTAGGCGGTACAGTACAAAATGCC 12672 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | || || || ||||| || ||||| | ||||| ||||| || |||||||| || Sbjct 12671 GTCGTAACAGTCCCTGCTTACTTTAATGACTCTCAACGACAAGCTACGAAAGATGCTGGG 12612 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||| | ||||||| || |||| || || ||||| || |||||||| | || Sbjct 12611 ACGATTGCTGCTATAAATGTACTAAGAATAATAAACGAACCAACGGCAGCTGCATTGGCG 12552 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| |||| || ||| | | ||||||||| | | |||||||| |||| Sbjct 12551 TATGGTCTAGATAA---AAATCTTAGTGGAGAAAAAAACGTACTTATATTTGATCTTGGC 12495 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAAT---TGAAGATGGGGTATTTGAAGTAAAG 451561 || ||||| ||| ||| |||| ||| ||||| | |||||||| | Sbjct 12494 GGGGGAACATTCGATGTTTCAATACTGCAAATATCTGAAGGCTCCCTTTTTGAAGTTCAA 12435 Query 451562 GCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | || || ||||||||| |||| || || ||| ||||||| Sbjct 12434 TCGACAGCAGGGGATACTCATTTAGGCGGCGAGGATTTTGATAA 12391 Score = 93.3 bits (102), Expect = 2e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||| ||||| ||||| |||||||| || || |||||||| || ||||| || |||||| Sbjct 11932 AATCCCGATGAGGCTGTGGCATATGGAGCAGCGGTTCAAGCGGCAATTCTCACCGGTTCA 11873 Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110 | || ||| | |||| || | | |||||||||||||| | || | || | Sbjct 11872 AAAGACGAACGGCTTCAAGATGTTTTACTGGTAGATGTAACACCATTGTCATTAGGTATA 11813 Query 452111 GAAACAGCTGGTGGAATGATGACTAA 452136 |||||||| || ||| | |||||||| Sbjct 11812 GAAACAGCCGGAGGAGTAATGACTAA 11787 >seq135 Length=777160 Score = 161 bits (178), Expect = 4e-34 Identities = 364/542 (67%), Gaps = 4/542 (1%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||||||||||||||||||||| | |||||||| || || | ||| ||||||| Sbjct 630414 AGCTATTGGAATTGATCTTGGAACCACATACTCATGTGTGGGAGTGTGGCAACATGGAAA 630355 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 || |||||||| ||||| |||||||| ||||| || || |||| || ||||| Sbjct 630354 CGTGGAAATTATCGCAAACGACCAAGGCAACCGAACAACACCATCATACGTTGCGTTTAC 630295 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAA 451091 || |||| |||||| | || | || ||||| | | | ||| || || | || | Sbjct 630294 AGACACAGAGAGACTTATTGGAGATGCCGCTAAGAACCA-GGTCGCTTTGAACCCGAATA 630236 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 | ||||| | || || || || |||| ||| | | | || || | | || Sbjct 630235 ATACAGTGTTCGACGCAAAGCGACTAATAGGCAGAAAATTCGACGACCCCAAGATTCAGC 630176 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 |||| | ||| || ||| | || || || | | || || | | ||||| | Sbjct 630175 AAGATATGAAACACTGGCCTTTCAAAGTTGTCAACGACTATGGCAAATCTAAAATTCAGG 630116 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAAT-TTCATCTATGGTTCTT 451270 | | | || || ||||| ||| ||| |||| |||||||| || | ||||| || Sbjct 630115 TGGAATTCAAGGGCGAAACAAAACGATTTTCTCCGGAAGAAATCAGCAGC-ATGGTCCTG 630057 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 || || ||||| ||||| || || ||| | ||| | | || | || || || || Sbjct 630056 ACGAAGATGAAGGAAACTGCTGAGGCGTATTTGGGTAGTTCGGTCAGAGACGCTGTTATA 629997 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || || || ||||| ||||| || | || || |||||||| || ||||| || ||| Sbjct 629996 ACGGTACCAGCTTACTTCAACGACTCCCAGCGCCAAGCAACAAAGGATGCGGGTGCGATT 629937 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 || ||| | || ||| | |||| ||||||||||| || || || ||| | || ||||| Sbjct 629936 GCCGGTATCAACGTTTTAAGAATAATTAATGAACCCACCGCTGCCGCTTTGGCTTATGGC 629877 Query 451451 CT 451452 || Sbjct 629876 CT 629875 Score = 91.5 bits (100), Expect = 6e-13 Identities = 248/374 (66%), Gaps = 7/374 (2%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||| |||||||| ||||| ||||| ||||| |||||||||||||| ||| || | Sbjct 629336 AATCCCGATGAAGCAGTTGCCTATGGCGCTGCGGTTCAAGCAGCTATCTTAAGTGGGGAA 629277 Query 452051 GATGA-TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | | |||||| | ||| | ||| |||||||||| | || | || | || | Sbjct 629276 CAGCACAGTAAAATTCAG-GATGTACTGCTAGTAGATGTTGCTCCATTGTCATTGGGTAT 629218 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAA--CTTCTATTCCTTGT 452167 ||| || || || ||| | ||||| || | ||| | | |||| | ||||| || Sbjct 629217 TGAGACTGCAGGAGGAGTAATGACGAAGATCATTGA--GCGGAATGCGAAGATTCCATGC 629160 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 | | || ||||| || | ||| || |||||||||| || || || || ||| Sbjct 629159 AGACAGTCGCAAACCTTCACCACATACTCGGACAACCAACCAGCCGTTACCATCCAGGTG 629100 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | || || || || || ||||| ||| || ||| || || |||| |||| | Sbjct 629099 TACGAGGGTGAGCGAGCTATGACTAAAGACAACAATCTGCTCGGGCGATTTGATCTTACT 629040 Query 452288 AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCA 452347 || ||||| ||| | ||| ||| | ||||| |||||| ||| | ||||| Sbjct 629039 GGAATACCTCCAGCTCCACGAGGAGTACCTAAGATTGATGTTACCTTCGATTTGGATGCC 628980 Query 452348 AATGGTATTCTTAA 452361 ||||| | |||||| Sbjct 628979 AATGG-AATCTTAA 628967 >seq74 Length=1026897 Score = 159 bits (176), Expect = 1e-33 Identities = 458/701 (65%), Gaps = 14/701 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||||||||||||||| || |||| || || || ||||| | ||| ||||||| Sbjct 373693 AGCTATTGGAATTGATCTTGGTACAACCTACTCTTGCGTTGGTGTCTGGCAACATGGAAA 373752 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 ||| || || || ||||||||||| || ||||| || || || | || ||||| Sbjct 373753 TGTGGAGATCATCGCAAATGACCAGGGCAACCGAACAACACCATCGTACGTCGCATTTAC 373812 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 ||| | || | || | || | || ||||| | ||| ||| || || | | Sbjct 373813 GGACACGGAGCGTCTGATCGGTGATGCAGCTAAGAACCAA--GTAGCTTTGAACCCTAGC 373870 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||||| || | ||||| ||| | | || ||||||| | || ||| | | ||| Sbjct 373871 AACACGGTGTTCGATGCGAAAAGGCTGATCGGCCGTAAATTCGACGATCCCAAAATTCAA 373930 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210 | || | ||| | | | | | || | ||| | | || || | || || Sbjct 373931 CAGGACATGAAACATTGGCCGTTTAAAGTGATCAATGACTGCAGTAAACCAAAGATCCAG 373990 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || | | || || ||||| ||| ||||| || |||||||| ||||||| | Sbjct 373991 GTTGAATTCAAGGGCGAAACCAAACGATTTGCCCCAGAAGAAATCAGTAGTATGGTTTTG 374050 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 |||||||| || ||||| || || |||| || |||| ||||| || | Sbjct 374051 GTGAAAATGAAGGAGACAGCTGAGGCCTACCTTGGATCATCAGTGCGAGATGCCGTCGTC 374110 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || ||||| || |||||||||||| |||| || || || || || ||||| || ||| Sbjct 374111 ACAGTTCCTGCCTATTTCAATGATTCACAGCGTCAGGCGACCAAGGATGCCGGGGTCATT 374170 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 ||||| |||||||| | || || || || || || || || |||||||| |||||||| Sbjct 374171 GCTGGAATAAATGTTTTACGGATCATAAACGAGCCCACCGCCGCTGCTCTGGCATATGGC 374230 Query 451451 CTAG--GAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 |||| |||||| ||| | ||| ||| | | | || ||| ||||||| | Sbjct 374231 CTAGACAAAAATCTTAAG-----GGCGAACGCAATGTCCTTATTTTCGATCTTGGTGGCG 374285 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAA 451565 | || ||| ||| | | | || || || || | |||||||||| || || | Sbjct 374286 GCACATTTGACGTTTCCATTTTGACGATCGACGAGGGTTCGCTATTTGAAGTGAAAGCCA 374345 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | || || || ||||| ||||||||||| |||| ||| Sbjct 374346 CGGCCGGAGACACACATCTTGGAGGTGAAGACTTTGACAAT 374386 >seq53 Length=2198565 Score = 136 bits (150), Expect = 2e-26 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| |||||||||||||| || ||||| || || | || |||||| | || Sbjct 1830985 AATGCAAATTTTTGTTAAAACACTGACAGGAAAAACCATCACATTGGAGGTTGAACCTTC 1831044 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||||| | ||||| ||||| ||||| |||||||| ||||| ||||| || Sbjct 1831045 AGACACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCA 1831104 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||| | || ||| | || || ||| | |||||||| |||| || | || || || Sbjct 1831105 GCAACGTCTTATCTTCGCTGGAAAGCAATTGGAAGATGGCCGAACGCTGTCAGACTACAA 1831164 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| |||| | || | ||| | | |||||||| Sbjct 1831165 CATTCAAAAGGAATCAACCTTGCATCTTGTACTCCGTCTGAGAGG 1831209 Score = 132 bits (146), Expect = 2e-25 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||||||||| || || ||||| || || || || || ||| | || Sbjct 1830757 AATGCAAATTTTCGTTAAAACACTCACAGGCAAAACCATCACCCTAGAAGTGGAAGCCTC 1830816 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||||||| | | ||| ||||||||||| |||||||| ||||| || || || Sbjct 1830817 TGACACCATTGAAAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCA 1830876 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||| | || || | || || || | |||||||| | || | | || || || Sbjct 1830877 GCAACGTCTCATCTTTGCTGGAAAGCAGTTGGAAGATGGCCGCACCCTTTCAGACTACAA 1830936 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACAtttttt 391288 ||| | ||||| |||||||||| | || ||| | || || ||| ||| || |||| Sbjct 1830937 CATTCAAAAGGAATCAACACTTCATCTTGTGTTACGTCTCAGGGGAGGAATGCAAATTTT 1830996 Query 391289 t 391289 | Sbjct 1830997 T 1830997 >seq66 Length=1166317 Score = 118 bits (130), Expect = 4e-21 Identities = 325/495 (66%), Gaps = 5/495 (1%) Strand=Plus/Plus Query 451103 GATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGAAAAAA 451162 |||||||||||| | ||||| |||| || ||| |||| ||| || || || | ||| Sbjct 407895 GATGCTAAACGTCTCATTGGGCGTAAGTTTGAAGATGCTACAGTTCAGGCTGACATGAAA 407954 Query 451163 TTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAA 451222 || | | ||| || | | | | ||||| || | || | || | || || Sbjct 407955 CACTGGCCATTTGAGGTTATCAGTGATGGTGGAAAACCAAAGATCAAGGTTCAATACAAG 408014 Query 451223 GGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAA 451282 |||||| ||||| || || || ||| | || ||||| | || |||||||| Sbjct 408015 GGTGAAGACAAAACATTCTTCCCAGAGGAAGTCAGTTCAATGGTATTAACAAAAATGAAG 408074 Query 451283 GAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCT 451342 |||||||| ||| || |||| | || ||||||||||||| || || || Sbjct 408075 GAAACAGCTGAAGTTTACCTTGGCAAAACGGTGCAGAATGCAGTAATTACAGTGCCAGCA 408134 Query 451343 TATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG-ACATATTGCTGGTTTAAA 451401 || || ||||| | ||| |||| || || |||||| | || ||| || ||||| | || Sbjct 408135 TACTTTAATGACTCCCAAAGGCAGGCCACAAAAGATTCTGGTACA-ATCTCTGGTCTGAA 408193 Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATC 451461 ||||| ||||| || |||||||| || || ||||| | |||||||| || | || Sbjct 408194 CGTTCTCCGAATCATCAATGAACCGACTGCTGCTGCGATTGCATATGGTCTTGACAA--- 408250 Query 451462 AAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATAC 451521 |||| | | |||| ||| | | | || ||| |||| || || ||| |||| Sbjct 408251 GAAAGGAGGTGGAGAACGTAATGTCCTTATTTTCGATCTTGGCGGTGGTACTTTTGATGT 408310 Query 451522 TTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCA 451581 || | || | ||||| || || | |||||||| ||| | || || || ||||| Sbjct 408311 ATCCATCCTCACCATTGAGGACGGTATCTTTGAAGTGAAGTCCACTGCCGGGGACACTCA 408370 Query 451582 TCTAGGAGGTGAAGA 451596 | |||||||| || Sbjct 408371 CTTGGGAGGTGAGGA 408385 >seq429 Length=186180 Score = 109 bits (120), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| || || ||||| || || || || || || || | || Sbjct 15486 ATGCAGATCTTTGTGAAAACCCTCACGGGTAAGACCATCACCCTAGAGGTGGAGGCCTCC 15545 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | || || || || |||||||| ||||| || ||||| ||| Sbjct 15546 GACACTATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGAATCCCACCTGACCAA 15605 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| |||||| | || ||||||||||||||||| | || || | || ||||| Sbjct 15606 CAGCGTTTGATTTTCGCTGGTAAACAACTTGAAGATGGGCGTACCCTGTCCGACTATAAC 15665 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | ||||| ||||| || || || || Sbjct 15666 ATCCAGAAGGAATCTACACTACACTTGGTGTTGAGGCT 15703 >seq401 Length=384550 Score = 107 bits (118), Expect = 8e-18 Identities = 304/458 (66%), Gaps = 13/458 (3%) Strand=Plus/Minus Query 502379 TTTGCTTACAGCACTAATGCCAACAGCATCTACATCTCAACTATTAGGCAATTATGAATC 502438 ||||||| ||| | ||||| || ||||| ||| | ||| | | || ||| ||||||| Sbjct 357250 TTTGCTTTTAGCGCCTATGCCTACCGCATCCACAGCACAAATTCTTGGAAATAATGAATC 357191 Query 502439 ATTTGAACCATTTACTTCTAATATATATACTAGAAGAACTTTAGCAGGTGAATTTATAGT 502498 |||||||| ||||| || || |||||| |||||| ||| |||| |||||| ||| Sbjct 357190 CTTTGAACCTTTTACATCAAACATATATCAGAGAAGAGTTTTGTCAGGAGAATTTCAAGT 357131 Query 502499 TGTTAATAAACATTTAATAAATGATTTGAATGAAATCGG-TGAATGGACTAATGAAATTA 502557 || || | ||| | | || ||||| || | || | | | |||| | | || || Sbjct 357130 AGTGAACCATCATCTTTTGAAAGATTT-AACGCAAGCAGATCTATGGGATGAAGACAT-- 357074 Query 502558 GACAAAAAGTA--ATTAATGATAATGGTTCTATTCAAAATAT---ATTACTACCTAATAT 502612 || ||| || ||| || | |||||||| ||||||||||| | | | || || Sbjct 357073 GAAAAACCTTATCATTCATAACAATGGTTCAATTCAAAATATCGAAAGAATTCCAAAAGA 357014 Query 502613 AATTAAAAACATCTATCAAACTTCATATGAAATGAAACAAAAATATATAAT--AGATGGA 502670 ||| | || | || |||| | ||||| | ||| | || | |||| Sbjct 357013 AATACGAGACTTATACAAAACAGTCTGGGAAATTTCAGTTAAAACGACGATCCAAATGGC 356954 Query 502671 TGTTCTATACGGGGAGCTTATATAGATCAAACCCAATCTATGAATCTTTATTTTGCACAA 502730 | | ||| |||| || | ||| ||||||| ||| ||| | ||| || || |||| || Sbjct 356953 AGCT-GATA-GGGGCGCATTTATTGATCAAAGCCAGTCTTTTAATATTCATGTTGCTGAA 356896 Query 502731 CCAGACTCTCAAAAATTAACTTCCTCTCAATTTTATGCATGGGAACAAGGATTAAAAACA 502790 ||| | | | |||||| || || ||| ||| |||||||| || || | ||||| Sbjct 356895 CCAAATTATGGAAAATTGACATCTATTCATTTTCATGCATGGAAAATGGGGCTTAAAACT 356836 Query 502791 GGGTTATATTATTTACGTAGCAAACCATCAGCAAATGC 502828 || | |||||||| || | |||||| | || ||||| Sbjct 356835 GGAATGTATTATTTGCGCACAAAACCAGCTGCCAATGC 356798 >seq578 Length=1472074 Score = 104 bits (114), Expect = 9e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || || || || ||||||||||| |||||| | || Sbjct 656041 ATGCAGATCTTCGTAAAAACTCTCACGGGGAAGACCATTACTCTTGAGGTTGAACCCTCG 656100 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| ||| | ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct 656101 GATACCATCGAAAATGTTAAAGCTAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAA 656160 Query 391170 CA 391171 || Sbjct 656161 CA 656162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975532393521584