Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq183 93.3 5e-14 >seq183 Length=738700 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/182 (71%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 119517 TCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTT 119576 ||||||| || || | ||||| |||||| || |||||||| |||||||| || || Sbjct 171509 TCATCCCTTGAAATCATTTCATTGCTGAAGGTTAGGCCAGGCATTAGTCCTCTCTTTTTC 171450 Query 119577 AGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCG 119636 |||||||| || | | |||||||||||| ||||| || ||||| ||| ||| || || Sbjct 171449 AGCCAAAATATTGAAGCAAAACTTCCAGAGAAGAAAATTCCCTCAACAGCGGCAAATGCT 171390 Query 119637 AATAGACGCTCAGCAAAAGGTCGAGACTTG---TCGAACCACTTGAGAGCCCAGTTGGCC 119693 | | | ||| |||| | ||| ||| | | ||||| ||||||||| | ||| Sbjct 171389 ACAATTCTTTCACCAAATGTAGCAGATTTGCTTGCTATCCACTGGAGAGCCCAATCTGCC 171330 Query 119694 TT 119695 || Sbjct 171329 TT 171328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588921902554400