Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 253 2e-61 seq135 163 2e-34 seq66 163 2e-34 seq74 154 1e-31 seq92 150 1e-30 seq229 125 6e-23 seq53 116 3e-20 seq8 100 2e-15 >seq6 Length=643904 Score = 253 bits (280), Expect = 2e-61 Identities = 412/586 (70%), Gaps = 8/586 (1%) Strand=Plus/Plus Query 549993 CTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAG 550052 |||| || || ||||||||||| || ||| ||||||||| || ||||| |||| || | Sbjct 132949 CTATTGGAATTGATTTAGGAACTACGTATTCTTGTGTTGGGGTGTGGCAGCATGGAAATG 133008 Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 | || ||||| || ||||| |||||||| ||||| || || ||||| || | || || | Sbjct 133009 TAGATATTATAGCTAATGACCAAGGTAATAGAACGACACCTTCTTACGTAGCCTTTACAG 133068 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | || || | | | ||||||||||| ||| |||||| | ||| || | ||| | Sbjct 133069 ATACAGAGCGACTGATAGGTGATGCAGCGAAAAATCAAGTGGCCCTTAACCCAAGCAACA 133128 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAG 550232 | |||||||| || ||||| ||||||| | | || | ||| | | |||| || Sbjct 133129 CCATTTTTGACGCAAAACGCCTAATTGGCCGCAAATTCGACGATCCAAAGATTCAACAAG 133188 Query 550233 ATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 |||| ||||||||||||||| || | | |||| | || || || | || ||| | Sbjct 133189 ATATTAAGCATTGGCCTTTCAAAGTAATAAATGACGCAGGTAAGCCCAAACTTCAAGTAA 133248 Query 550293 CTCATGAAGGATCTG-TTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351 || | |||| || | ||| | ||| | || ||| ||||| |||||| | || Sbjct 133249 CTTACAAAGG-TCAGACGAAAAAGTTTGCTCCTGAAGAAATTAGTAGCATGGTTCTTATA 133307 Query 550352 AAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 ||||||||| ||| || || | | | || | ||| | |||||| ||||| Sbjct 133308 AAAATGAAAGAAATCGCTCAAAAC-TACCTCGGGACATCAGTGAATAGTGCAGTGATAAC 133366 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 || || || |||||||||||||| || | ||||| |||||||||||||| |||||| Sbjct 133367 AGTCCCTGCCTATTTTAATGACTCGCAGAGGCAAGCCACTAAAGATGCTGGTGCTATTGC 133426 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 ||| || || |||||||||||||| || |||||||| || ||||| | |||||||| | Sbjct 133427 TGGTCTAAACGTTCTTCGTATTATTAACGAACCTACCGCCGCTGCTTTGGCATATGGGTT 133486 Query 550531 TGAT--AAACATAATGATCAAGAACTTAATGTACTCATCTTTGATT 550574 ||| |||| ||| | |||| ||||| || || ||||||| Sbjct 133487 AGATAAAAACTTAAAGGGTGAGAA--AAATGTCCTAATATTTGATT 133530 Score = 203 bits (224), Expect = 3e-46 Identities = 541/824 (66%), Gaps = 12/824 (1%) Strand=Plus/Plus Query 551757 GAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGAT 551816 |||| | ||||||| || ||||||| || || |||| | ||||| |||||| Sbjct 133572 GAAGGTTCTCTCTTTGAGGTTAAAGCTACTGCAGGCGACACTCACTTGGGTGGAGAAGAT 133631 Query 551817 TTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTGAT 551876 ||||||| |||||| || | | | ||| || |||||| ||||| ||||| ||| Sbjct 133632 TTTGATAGTAGACTTGTTAATTTCTTAGCTGATGAATTTAAAAGAAAACACAAAAAAGAT 133691 Query 551877 CTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGA 551936 || || | ||||| | || ||| |||| || ||| || ||| | ||||| Sbjct 133692 TTACGAACTAACCCTAAAGCCTTACGCCGTTTAAGGACAGCTGCTGAGAGAACAAAACGT 133751 Query 551937 GCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGAT 551996 || | || ||| | ||| || | | ||||||| |||| |||||| ||| || || ||| Sbjct 133752 ACTTTGTCGTCTAGCACTGAAGCAAGTATTGAAATAGACGCATTATATGAAGGCATAGAT 133811 Query 551997 TATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAA 552056 | | | || || || || |||||||| | || || || || | | Sbjct 133812 TTCTACTCAAAAATATCAAGAGCACGTTTTGAAGAGCTGAACTCAGACCTGTTCCGTATG 133871 Query 552057 ACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAA--ATCCAAAGTAC 552114 || |||| ||||| || ||| ||||||||| |||| | || || || | | || Sbjct 133872 ACCCTTGATCCAGTCGAGAAAGCGTTAAGAGATGCAAAATTGGACAAGAATGCTATTAAC 133931 Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT----A 552170 || || || | || || || || || || ||||| ||||||| | | || | Sbjct 133932 --GATATCGTCATGGTCGGGGGTTCAACGAGGATTCCAAAAATTCAAAATTTATTGCAGA 133989 Query 552171 AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCC 552230 | ||||| |||||| || || | ||| | ||||||| ||||||||||| || Sbjct 133990 ATTTCTT----CAATGGAAAGAAGCTCAATATGTCTATTAATCCTGATGAGGCTGTGGCT 134045 Query 552231 TATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAAT 552290 ||||| || ||| ||||||| ||||| | ||| | | || ||| | || | Sbjct 134046 TATGGGGCAGCAGTTCAAGCGGCTATATTAAGCGGAGAGAAACATTCAAAGATTAAAGAC 134105 Query 552291 ATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATG 552350 | |||| || |||||||| || | || | ||| | || || | || || ||||| Sbjct 134106 GTCTTACTAGTTGATGTTACGCCCTTGTCATTGGGTATTGAGACTGCAGGTGGAGTTATG 134165 Query 552351 ACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACG 552410 || || || |||| | || | | || || || || | |||| |||| |||| Sbjct 134166 ACGAAGATTGTCGAACGTAACGCAAAGATACCCTGCAAGCATTCTCAAATATTCACTACT 134225 Query 552411 TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACT 552470 || || ||||||||| | ||||| | || ||| ||| |||||| ||| | | ||| Sbjct 134226 TACTCGGATAATCAACCAGCTGTGTCTATCCAAGTTTATGAAGGTGAACGTGCTCTTACT 134285 Query 552471 AAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGA 552530 ||||| || |||| | || || ||| | | || ||||| || |||||||||||| Sbjct 134286 AAAGACAACAATCTGTTAGGCACCTTTGACCTGACTGGGATTCCACCGGCTCCTCGTGGA 134345 Query 552531 GTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAAT 552574 || ||||||||||| || | ||||| || ||||| |||||||| Sbjct 134346 GTGCCGCAAATTGATGTATCATTCGACATGGATGCTAATGGAAT 134389 >seq135 Length=777160 Score = 163 bits (180), Expect = 2e-34 Identities = 371/551 (67%), Gaps = 8/551 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || ||| | ||||||||||| ||||| || || |||||| |||| || Sbjct 630414 AGCTATTGGAATTGATCTTGGAACCACATACTCATGTGTGGGAGTGTGGCAACATGGAAA 630355 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || |||||||| || || || ||||| ||| |||| || ||||| || ||| | || || Sbjct 630354 CGTGGAAATTATCGCAAACGACCAAGGCAACCGAACAACACCATCATACGTTGCGTTTAC 630295 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 || || || | | ||| |||| ||||| || || | || | | || || || | | Sbjct 630294 AGACACAGAGAGACTTA-TTGGAGATGCCGCTAAGAACCAGGTCGCTTTGAACCCGAATA 630236 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 |||| | || || || || || |||| || |||| || | || | | ||||| Sbjct 630235 ATACAGTGTTCGACGCAAAGCGACTAATAGGCAGAAAATTCGACGACCCCAAGATTCAGC 630176 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATT--GA 550287 ||||||||| || ||||||||| || |||| || | | ||| ||| || | ||| | Sbjct 630175 AAGATATGAAACACTGGCCTTTCAAAGTTGTCAACGACTATGGCAAATCTAAAATTCAGG 630116 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAAT-TTCATCTATGGTTT 550346 | | ||| | || |||| |||||| || ||| |||| || | ||||| Sbjct 630115 TGGAATTCA--AGGGCGAAACAAAACGATTTTCTCCGGAAGAAATCAGCAGC-ATGGTCC 630059 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | | ||| ||||| |||| || || | | | ||| || | || || || | Sbjct 630058 TGACGAAGATGAAGGAAACTGCTGAGGCGTATTTGGGTAGTTCGGTCAGAGACGCTGTTA 629999 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 |||| |||||||| || || || ||||| || || ||||| || || ||||| || | Sbjct 629998 TAACGGTACCAGCTTACTTCAACGACTCCCAGCGCCAAGCAACAAAGGATGCGGGTGCGA 629939 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 |||| || | || ||| | | || || |||||||| || ||||| || | || |||| Sbjct 629938 TTGCCGGTATCAACGTTTTAAGAATAATTAATGAACCCACCGCTGCCGCTTTGGCTTATG 629879 Query 550527 GACTTGATAAA 550537 | || || ||| Sbjct 629878 GCCTGGACAAA 629868 Score = 107 bits (118), Expect = 2e-17 Identities = 444/697 (64%), Gaps = 14/697 (2%) Strand=Plus/Minus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 ||||||||||| ||| |||| ||| |||||||| ||||| | | ||||| | || Sbjct 629651 GCTCTTCGTCGACTACGAACCGCTGCTGAAAGAGCTAAACGGACCTTATCATCGAGCACG 629592 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 || |||| |||||| |||| | | | || |||||||| || | || |||| Sbjct 629591 GAAGCCACCATTGAAATAGACGCTCTCTACGAAGGAATTGACTACTACACCAGGGTTTCT 629532 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 | || ||||| || | |||||| | || | || | |||||||| || Sbjct 629531 CGCGCACGGTTTGAGGAATTAAACTCTGATTTGTTCCGCGGTACTCTGGAACCAGTCGAG 629472 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | | | | ||| | || |||| ||| | | || || | || | || || Sbjct 629471 AAGGCCCTCAAGGATGCTAAACTTGACAAAAGCTCTATTCACGATGTAGTATTAGTGGGC 629412 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTT----AAGTTCTTATTTCAATGGTAA 552190 || || || | ||||| ||||||| ||| | || ||||| | | ||||| Sbjct 629411 GGTTCCACTCGTATTCCAAAAATTCAAAGCATGCTGCAAAACTTCTTCTGT----GGTAA 629356 Query 552191 AAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGC 552250 ||||| || | ||||| ||||| || ||||||||||| || || ||||||| Sbjct 629355 GAAATTGAACCTCTCCATCAATCCCGATGAAGCAGTTGCCTATGGCGCTGCGGTTCAAGC 629296 Query 552251 AGCTATTCTT---TCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGT 552307 |||||| ||| | ||| | | | |||| | || || | | || |||||||| Sbjct 629295 AGCTAT-CTTAAGTGGGGAACAGCACAGTAAAA--TTCAGGATGTACTGCTAGTAGATGT 629239 Query 552308 TACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAG 552367 | |||| | || | ||| | || || | ||||| | ||||| || | || || | Sbjct 629238 TGCTCCATTGTCATTGGGTATTGAGACTGCAGGAGGAGTAATGACGAAGATCATTGAGCG 629179 Query 552368 AAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAAC 552427 ||| | | ||||| || | | | || | || | || || || || || ||| | Sbjct 629178 GAATGCGAAGATTCCATGCAGACAGTCGCAAACCTTCACCACATACTCGGACAACCAACC 629119 Query 552428 TGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACT 552487 || ||||| || || | | || || || || | |||||||| || |||| || Sbjct 629118 AGCCGTTACCATCCAGGTGTACGAGGGTGAGCGAGCTATGACTAAAGACAACAATCTGCT 629059 Query 552488 TGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT 552547 || ||| || | || || ||||| ||||| || |||||||| | ||||| || Sbjct 629058 CGGGCGATTTGATCTTACTGGAATACCTCCAGCTCCACGAGGAGTACCTAAGATTGATGT 628999 Query 552548 TACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584 ||| |||||| | |||||||||||||| || || ||| Sbjct 628998 TACCTTCGATTTGGATGCCAATGGAATCTTAAACGTG 628962 >seq66 Length=1166317 Score = 163 bits (180), Expect = 2e-34 Identities = 284/405 (70%), Gaps = 6/405 (1%) Strand=Plus/Plus Query 550181 GATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAA 550239 |||||||||||| | ||||| | |||||| || ||| | || |||||||| || ||||| Sbjct 407895 GATGCTAAACGTCTCATTGGGCGTAAGTTTGAA-GATGCTACAGTTCAGGCTGACATGAA 407953 Query 550240 GCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGA 550299 || ||||| || | || | | || | ||||||||| | || ||| | | | Sbjct 407954 ACACTGGCCATTTGAGGTTATCAGTGATGGTGGAAAACCAAAGATC-AAGGTTCAATACA 408012 Query 550300 AGGATCT-GTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGA 550358 ||| | | ||| ||| | ||||| || | || ||||| |||| ||||||| Sbjct 408013 AGGGTGAAGACAAAACATTCTTCCCAGAGGAAGTCAGTTCAATGGTATTAACAAAAATGA 408072 Query 550359 AACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGA-TGCAGTAATAACTGTACCA 550417 | ||||||| | || |||| ||| | | | | || ||||||||| || || ||| Sbjct 408073 AGGAAACAGCTGAAGTTTACCTTGG-CAAAACGGTGCAGAATGCAGTAATTACAGTGCCA 408131 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 ||||| ||||||||||| ||| | || || || |||||| |||| || |||| || Sbjct 408132 GCATACTTTAATGACTCCCAAAGGCAGGCCACAAAAGATTCTGGTACAATCTCTGGTCTG 408191 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || ||||| || || ||||||||||| ||||||||||| |||||||||| ||||| || Sbjct 408192 AACGTTCTCCGAATCATCAATGAACCGACTGCTGCTGCGATTGCATATGGTCTTGACAAG 408251 Query 550538 CATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 | | | ||||| |||||| || || || ||| ||| ||| Sbjct 408252 AAAGGAGGTGGAGAACGTAATGTCCTTATTTTCGATCTTGGCGGT 408296 >seq74 Length=1026897 Score = 154 bits (170), Expect = 1e-31 Identities = 391/593 (66%), Gaps = 4/593 (1%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || ||| | || || || || ||| |||||||| |||||| |||| || Sbjct 373693 AGCTATTGGAATTGATCTTGGTACAACCTACTCTTGCGTTGGTGTCTGGCAACATGGAAA 373752 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || || || || ||||| || || ||| |||| || ||||| || || | || || Sbjct 373753 TGTGGAGATCATCGCAAATGACCAGGGCAACCGAACAACACCATCGTACGTCGCATTTAC 373812 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| || || | | | | ||||||||||| || | |||| || || |||| ||| Sbjct 373813 GGACACGGAGCGTCTGATCGGTGATGCAGCTAAGAACCAAGTAGCTTTGAACCCTAGCAA 373872 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | || ||||| ||| | | || || | | || | ||| | | |||| Sbjct 373873 CACGGTGTTCGATGCGAAAAGGCTGATCGGCCGTAAATTCGACGATCCCAAAATTCAACA 373932 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 || ||||| |||||||| || || | | |||| | | ||||| | || | | Sbjct 373933 GGACATGAAACATTGGCCGTTTAAAGTGATCAATGACTGCAGTAAACCAAAGATCCAGGT 373992 Query 550291 T--ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | | ||| | || |||| |||| | |||||| |||| ||||||||| Sbjct 373993 TGAATTCA--AGGGCGAAACCAAACGATTTGCCCCAGAAGAAATCAGTAGTATGGTTTTG 374050 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 |||||||||| | ||||| || | |||| | ||| ||||| || | Sbjct 374051 GTGAAAATGAAGGAGACAGCTGAGGCCTACCTTGGATCATCAGTGCGAGATGCCGTCGTC 374110 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || ||||| ||||| ||||| ||||| || || || ||||| || ||| Sbjct 374111 ACAGTTCCTGCCTATTTCAATGATTCACAGCGTCAGGCGACCAAGGATGCCGGGGTCATT 374170 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 |||||| | |||||| | || || || || || || || || ||||| || |||||||| Sbjct 374171 GCTGGAATAAATGTTTTACGGATCATAAACGAGCCCACCGCCGCTGCTCTGGCATATGGC 374230 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 || || ||| || | | |||| ||||| || || || ||| ||| || Sbjct 374231 CTAGACAAAAATCTTAAGGGCGAACGCAATGTCCTTATTTTCGATCTTGGTGG 374283 Score = 141 bits (156), Expect = 7e-28 Identities = 427/657 (65%), Gaps = 2/657 (0%) Strand=Plus/Plus Query 551928 GCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAG 551987 ||||| || || | |||||| | || | |||| ||||| | || | ||| || Sbjct 374489 GCCAAGCGCACTTTATCATCTAGCACCGAGGCCACGGTTGAAATCGACGCGCTATACGAA 374548 Query 551988 GGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTC 552047 |||||||| | |||| | | | || |||| || ||||| | | ||||||| Sbjct 374549 GGAATTGACTTCTATACTCGTGTATCTCGGGCTCGCTTCGAAGAATTAAATGCTGATCTT 374608 Query 552048 TTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCC 552107 || | || | |||||||| ||| ||| || | |||| | ||||| ||||| | Sbjct 374609 TTCCGGGGCACCCTCGAACCAGTGGAAAAAGCATTGAAAGATGCTAAGATGGATAAGAGC 374668 Query 552108 AAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATG 552167 |||||||||| | || || || ||||| ||||| | || ||||| || | || Sbjct 374669 CAAGTACATGACGTGGTTCTCGTCGGTGGGTCTACTCGTATCCCTAAGATACAATCCTTG 374728 Query 552168 TTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGT 552226 || | ||| || | |||||| | | | || | || || ||||||||||| Sbjct 374729 CTACAAAACTTCTT-CTGTGGTAAGACACTTAACCTTTCCATCAACCCCGATGAGGCTGT 374787 Query 552227 TGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACA 552286 || ||||| || || | || ||||||||| | || ||||| | || | || Sbjct 374788 GGCATATGGAGCGGCGGTCCAGGCAGCTATTTTGAGCGGCGAAACTCACTCTAAGATCCA 374847 Query 552287 AAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTAT 552346 || | || | |||||||| |||| || || ||||| ||||||| | ||||| | Sbjct 374848 GGATGTGTTATTGGTAGATGTAGCTCCGCTGTCGCTTGGCATAGAAACTGCGGGAGGAGT 374907 Query 552347 TATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTC 552406 ||||| || | || || | || | || || || || |||||| ||| | Sbjct 374908 CATGACCAAGATAATTGAACGTAACTGCAAGATCCCGTGCAAGCAATCTCAGACATTCAC 374967 Query 552407 TACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATT 552466 || ||||| || ||||| |||| || || || ||| | | |||||| ||| || | | Sbjct 374968 CACCTATTCTGACAATCAGCCTGCAGTAACTATCCAAGTGTATGAAGGTGAACGAGCAAT 375027 Query 552467 CACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCG 552526 || ||||| || |||| ||||| ||||| || | ||| || || ||||| || || Sbjct 375028 GACAAAAGACAACAATCTCCTTGGCACTTTCGATCTGACAGGCATACCACCTGCACCGCG 375087 Query 552527 TGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 || || || |||| || || || ||||| | || ||||| || ||| | ||||| Sbjct 375088 AGGCGTGCCTAAAATCGACGTCACATTCGACTTGGACGCCAACGGTATTCTTAATGT 375144 >seq92 Length=1326259 Score = 150 bits (166), Expect = 1e-30 Identities = 379/570 (66%), Gaps = 21/570 (4%) Strand=Plus/Plus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 |||||||||||| | ||||||| |||||| ||||| ||||| || || |||||| | | Sbjct 161523 GTGTTGGTGTTTACAAGAATGGTAGAGTTGAGATTATAGCCAACGACCAGGGTAACCGTA 161582 Query 550086 CTACTCCATCTTATGTTTCTTTCACGG---AAACTGAACATTTAGTTGGTGATGCAGCAA 550142 |||||||| ||||| | ||||| | | ||||| | | |||| ||||| |||| Sbjct 161583 TCACTCCATCATATGTAGCCTTCACTGCTGATGGTGAACGTCTTATTGGAGATGCCGCAA 161642 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 | | || |||| |||||| || || | ||||||||||| ||| | ||||| Sbjct 161643 AGAACCAGCTCACTACAAATCCTGAAAACACAGTATTTGATGCTAAGCGTCTTATTGGTC 161702 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 | | | || || ||||| || ||| | || | || ||| | | ||| Sbjct 161703 GTGAATGGACAGACTCCACTGTCCAACATGATGTCAAATTCTTCCCCTTCAAGGTAGTTG 161762 Query 550263 ATGTTTCTGGAAAACCTTATAT-----TGAAGCTACTCATGAAGGATCTGTTAAACAATT 550317 | |||||| || | |||| ||| ||||| | || || Sbjct 161763 AGAAGAACACCAAACCTCATGTGGCTGTGAAA--ACTGCCCAAGGA---GACAAGGTGTT 161817 Query 550318 TTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTT 550377 | |||| ||| |||| ||| ||||||| | | || ||||| |||| || |||| Sbjct 161818 TGCACCTGAAGAAATCTCAGCTATGGTGCTGACTAAGATGAAGGAAACTGCTGAAGCTTA 161877 Query 550378 TGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCAC 550436 | |||| ||||||| |||| | || || |||||||||| || || || || ||| | | Sbjct 161878 TCTTGG-CAAGAAGGTTACCCACGCTGTCGTAACTGTACCCGCCTACTTCAACGACGCTC 161936 Query 550437 AACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCA 550496 |||||||||| ||||||||||||||| |||||||| || || || | | || || | Sbjct 161937 AACGTCAAGCGACTAAAGATGCTGGAGTAATTGCTGGCCTCAACGTCATGAGAATAATTA 161996 Query 550497 ATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTA 550556 | || ||||| ||||||||| |||| || || || || | | || || |||| | Sbjct 161997 ACGAGCCTACCGCTGCTGCAATTGCCTACGGTCTCGACA---AGAAAGACGGAGAAAAGA 162053 Query 550557 ATGTACTCATCTTTGATT---GTGGAGGTA 550583 |||| || | ||||||| |||| |||| Sbjct 162054 ATGTGCTTGTATTTGATTTAGGTGGTGGTA 162083 >seq229 Length=252579 Score = 125 bits (138), Expect = 6e-23 Identities = 193/273 (71%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 ||| | ||||| ||||| |||| || ||||||||| | | ||||||||| | ||||| Sbjct 12764 AAAAAGTTTTCTCCAGAGGAAATATCTTCTATGGTTCTGACAAAAATGAAAGACACAGCT 12705 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 ||| | | || ||| |||| || |||| || || || || |||||| Sbjct 12704 GAAACTTATCTAGGCGGTACAGTACAAAATGCCGTCGTAACAGTCCCTGCTTACTTTAAT 12645 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCT-GGACGTATTGCTGGACTTAATGTTCTTCG 550488 ||||| ||||| |||||||| ||||||||| ||||| ||||||| | ||||| || | Sbjct 12644 GACTCTCAACGACAAGCTACGAAAGATGCTGGGACG-ATTGCTGCTATAAATGTACTAAG 12586 Query 550489 TATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCA 550548 || || || ||||| || || |||||| | || ||||| || |||||| || | | Sbjct 12585 AATAATAAACGAACCAACGGCAGCTGCATTGGCGTATGGTCTAGATAAAAATCTTAGTGG 12526 Query 550549 AGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 |||| || ||||| || |||||| ||| || Sbjct 12525 AGAAAAAAACGTACTTATATTTGATCTTGGCGG 12493 Score = 113 bits (124), Expect = 4e-19 Identities = 119/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| ||||||||| | || || |||| ||||| || || | ||||||||||| Sbjct 13170 GCTATTGGTATAGATCTCGGTACAACATTCTCCTGTGTAGGAGTATTTCAAAATGGTAAG 13111 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||||||| || ||||| ||||| || ||| ||| || || ||||| | || || Sbjct 13110 GTTGAAATTATCGCAAATGAACAAGGAAATAGAGTTACCCCTTCATATGTCGCCTTTACT 13051 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAA 550144 |||||||| | ||||| ||||||||||||| ||| Sbjct 13050 GAAACTGAGAGATTTA-TTGGTGATGCAGCTAAA 13018 Score = 100 bits (110), Expect = 2e-15 Identities = 167/240 (70%), Gaps = 10/240 (4%) Strand=Plus/Minus Query 552208 TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGAC 552267 ||||||| ||||||||||| || ||||| || || ||||||| || ||||| | || Sbjct 11934 TTAATCCCGATGAGGCTGTGGCATATGGAGCAGCGGTTCAAGCGGCAATTCTCACCGGTT 11875 Query 552268 AAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTT 552327 || || ||| || ||| || || |||| |||||||| || || | || | ||| Sbjct 11874 CAAAAGACGAACGGCTTCAAGATGTTTTACTGGTAGATGTAACACCATTGTCATTAGGTA 11815 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC--TTG 552385 ||||||||| ||||| | |||||||| || |||| || ||||| | || || | | Sbjct 11814 TAGAAACAGCCGGAGGAGTAATGACTAAACTGGTCGAAAGGAATACGAGAATCCCTATAG 11755 Query 552386 TA---AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 | ||||| || ||||| || ||| | ||||| ||| | || || ||||| || Sbjct 11754 CACAGAAAAA-----GGTTTTTTCAACTTATGCTGATAACCAACCGGCCGTAACAATACA 11700 >seq53 Length=2198565 Score = 116 bits (128), Expect = 3e-20 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||||||||| | ||||||||||| || ||| || ||| ||||| || | || || Sbjct 1830979 CCTGAGACGTAACACAAGATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCTGAAAGGGT 1830920 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | |||||| | || ||||| ||||| || || | |||||| || || ||||| || Sbjct 1830919 GCGGCCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGCTGGTCTGGTGGAATACC 1830860 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGA 563431 ||| || ||||||||||| ||| || ||||| || |||| | | | || ||| | Sbjct 1830859 TTCCTTGTCTTGAATTTTAGCTTTGACATTTTCAATGGTGTCAGAG-GCTTCCACTTCTA 1830801 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || | ||||| || || || |||||||||||||||||||| Sbjct 1830800 GGGTGATGGTTTTGCCTGTGAGTGTTTTAACGAAAATTTGCAT 1830758 Score = 113 bits (124), Expect = 4e-19 Identities = 162/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATG-AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 || ||||||||||||||||| |||| | || |||| | ||| ||||| || | || || Sbjct 1831206 CTCAGACGGAGTACAAGATGCAAGGTTGATTCCTTTTG-AATGTTGTAGTCTGACAGCGT 1831148 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 || |||||| | ||| ||||| || || ||||| | |||||| ||||| ||||| || Sbjct 1831147 TCGGCCATCTTCCAATTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGTGGAATACC 1831088 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCG 563430 ||| || ||||| ||||| ||| || ||||| || || || || || || Sbjct 1831087 TTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTGTC--TGAAGGTTCAACCTCC 1831030 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || | ||||| || || || |||||||| ||||||||||| Sbjct 1831029 AATGTGATGGTTTTTCCTGTCAGTGTTTTAACAAAAATTTGCAT 1830986 Score = 89.7 bits (98), Expect = 4e-12 Identities = 157/225 (70%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 |||||||| | ||||||||||| || ||| |||| ||| ||||| || | || | Sbjct 1830750 CTGAGACGTAACACAAGATGAAGTGTTGACTCCTTTTG--AATGTTGTAGTCTGAAAGGG 1830693 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 | | |||||| | || ||||| ||||| || || | |||||| || || ||||| | Sbjct 1830692 TGCGGCCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGCTGGTCTGGTGGAATAC 1830633 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTC 563429 |||| || || || ||||| ||| || ||||| || || || || || ||| Sbjct 1830632 CTTCCTTGTCCTGGATTTTAGCTTTAACATTTTCAATGGTGTC--TGAAGGTTCAACTTC 1830575 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || | ||||| || ||||||||||| ||||| || ||||| Sbjct 1830574 TAATGTGATGGTTTTTCCCGTAAGAGTTTTTACGAAGATCTGCAT 1830530 >seq8 Length=546151 Score = 100 bits (110), Expect = 2e-15 Identities = 121/162 (75%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 930666 GATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATT 930725 ||||| ||||||||||||||||| |||||||||||| |||| || || | || || ||| Sbjct 411054 GATTTCTCTTCACCAAATATTGCTAAAGAAATGCATGTTGGTCACTTAAGATCAACTATT 411113 Query 930726 ATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGA-AGTAAAGTTCATCGAGTCAA 930784 ||||| || ||||| | ||| |||| | || | | | || | ||| | || Sbjct 411114 ATTGGGGACAGCATATGTCGTGTATTAGAAT-TCCTGAACCATGATGTCCTTCGTATAAA 411172 Query 930785 TCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 930826 |||| ||||||| ||||| ||||| ||||||||| | ||||| Sbjct 411173 TCATCTTGGTGACTGGGGCACACAGTTTGGTATGCTTATTGC 411214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028907404620520