Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq183 105 1e-17 >seq183 Length=738700 Score = 105 bits (116), Expect = 1e-17 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || || || ||||| || || || ||||| || || ||||| ||||| || Sbjct 171049 TACATTTCTGAATGTACATTTTCCATTGCAATCTGAAAGCCATAGAAACATCTGGCTTCT 170990 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || || || ||| |||||| || || | |||||| ||||||||||| |||||||| Sbjct 170989 GTTACTTGTACCTCTTGGGAGAACCTTTCAACCAGATTTTCATTGACTATGCCATCTGAT 170930 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTC 48585 ||||||||||| || | ||||| |||| ||| || | ||| Sbjct 170929 GCAGCAAAGAAAGCCAATACATGCTTAATGAAGTGCCTCTC 170889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931447238712320