Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq6 237 1e-56 seq74 226 2e-53 seq135 188 5e-42 seq66 183 2e-40 seq53 181 7e-40 seq92 132 3e-25 seq229 116 2e-20 seq245 96.9 2e-14 seq16 95.1 8e-14 seq80 86.0 4e-11 >seq6 Length=643904 Score = 237 bits (262), Expect = 1e-56 Identities = 407/588 (69%), Gaps = 16/588 (3%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 ||||| ||||||||||||||||| || |||||| | || ||||| |||| || ||| Sbjct 132951 ATTGGAATTGATTTAGGAACTACGTATTCTTGTGTTGGGGTGTGGCAGCATGGAAATGTA 133010 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || || |||||||||||||||||||| ||||| || || || | ||||| || Sbjct 133011 GATATTATAGCTAATGACCAAGGTAATAGAACGACACCTTCTTACGTAGCCTTTACAGAT 133070 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | || || || ||||| || ||| |||||| || ||| || || || Sbjct 133071 ACAGAGCGACTGATAGGTGATGCAGCGAAAAATCAAGTGGCCCTTAACCCAAGCAACACC 133130 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 |||||||| || ||| | | ||||| || || || || ||| | | | ||| ||| Sbjct 133131 ATTTTTGACGCAAAACGCCTAATTGGCCGCAAATTCGACGATCCAAAGATTCAACAAGAT 133190 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631 || ||||||||||| || || ||||||| | ||||| || | | ||| || Sbjct 133191 ATTAAGCATTGGCCTTTCAAAGTAATAAATGACGCAGGTAAGCCCAAACTTCAAGTAACT 133250 Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691 || |||| | || ||| | ||| | || ||| ||||| | |||||| | ||| Sbjct 133251 TACAAAGGTCAGACGAAAAAGTTTGCTCCTGAAGAAATTAGTAGCATGGTTCTTATAAAA 133310 Query 474692 ATGAAACAAACCGCGAGCTCA----TATCTTGGACAAGAAGTAACTGATGCAGTAATTAC 474747 |||||| ||| | ||||| || || || | ||| | | |||||| || || Sbjct 133311 ATGAAAGAAATC----GCTCAAAACTACCTCGGGACATCAGTGAATAGTGCAGTGATAAC 133366 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 || || || ||||||||||| || || | ||||| ||||||||||| || ||||| Sbjct 133367 AGTCCCTGCCTATTTTAATGACTCGCAGAGGCAAGCCACTAAAGATGCTGGTGCTATTGC 133426 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 ||||| || ||| | ||||||||||| ||||| || || || || | || ||||| | Sbjct 133427 TGGTCTAAACGTTCTTCGTATTATTAACGAACCTACCGCCGCTGCTTTGGCATATGGGTT 133486 Query 474868 TGATAAGAATTCTGACA----AAGAAGTAAATGTTTTAATCTTTGATT 474911 ||||| || || | | |||| |||||| |||| ||||||| Sbjct 133487 AGATAAAAA--CTTAAAGGGTGAGAA--AAATGTCCTAATATTTGATT 133530 >seq74 Length=1026897 Score = 226 bits (250), Expect = 2e-53 Identities = 384/552 (70%), Gaps = 6/552 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| |||||| | || || || ||| ||| || | ||| |||||| |||| || Sbjct 373694 GCTATTGGAATTGATCTTGGTACAACCTACTCTTGCGTTGGTGTCTGGCAACATGGAAAT 373753 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || || |||||||| || || ||||||||||||| || || | ||||| Sbjct 373754 GTGGAGATCATCGCAAATGACCAGGGCAACCGAACAACACCATCGTACGTCGCATTTACG 373813 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | ||| || || ||||| ||||| | |||| || | || ||| || Sbjct 373814 GACACGGAGCGTCTGATCGGTGATGCAGCTAAGAACCAAGTAGCTTTGAACCCTAGCAAC 373873 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || ||||| ||||| |||| || ||||| || || ||| ||| | ||| Sbjct 373874 ACGGTGTTCGATGCGAAAAGGCTGATCGGCCGTAAATTCGACGATCCCAAAATTCAACAG 373933 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AGAAG 474626 || ||| |||||||| ||||| ||||| |||| | |||||||| | || || Sbjct 373934 GACATGAAACATTGGCCGTTTAAAGTGATCAATGACTGCAGTAAACCAAAGATCCAGGTT 373993 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 ||| || | || ||||| |||| |||| | || ||| |||| | |||||||| | Sbjct 373994 GAATTCAAG--GGCGAAACCAAACGATTTGCCCCAGAAGAAATCAGTAGTATGGTTTTGG 374051 Query 474687 CCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 |||||||| | || || ||| | || |||||| | ||| ||||| || | Sbjct 374052 TGAAAATGAAGGAGACAGCTGAG-GCCTACCTTGGATCATCAGTGCGAGATGCCGTCGTC 374110 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || ||||| || ||||| |||||||| || ||||| || || || ||||| || ||| Sbjct 374111 ACAGTTCCTGCCTATTTCAATGATTCACAGCGTCAGGCGACCAAGGATGCCGGGGTCATT 374170 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || | ||||||||||| || || || || || || || || || || || ||||| Sbjct 374171 GCTGGAATAAATGTTTTACGGATCATAAACGAGCCCACCGCCGCTGCTCTGGCATATGGC 374230 Query 474866 CTTGATAAGAAT 474877 || || || ||| Sbjct 374231 CTAGACAAAAAT 374242 Score = 136 bits (150), Expect = 3e-26 Identities = 257/376 (68%), Gaps = 4/376 (1%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || ||||| ||||| ||||||||||| || ||||| ||||||||||| || || Sbjct 374771 AACCCCGATGAGGCTGTGGCATATGGAGCGGCGGTCCAGGCAGCTATTTTGAGCGGCGAA 374830 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 | || || | | || | || | || || ||| |||| || || | || | Sbjct 374831 ACTCACTCTAAGATCCAGGATGTGTTATTGGTAGATGTAGCTCCGCTGTCGCTTGGCATA 374890 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTA--TCCCATGCA 475970 ||||| | ||||| | ||||| || | ||||| | || || | | |||| |||| Sbjct 374891 GAAACTGCGGGAGGAGTCATGACCAAGATAATTGAACGTAA--CTGCAAGATCCCGTGCA 374948 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | |||| | ||| |||| |||||||| ||||| | | ||||| |||||| | | Sbjct 374949 AGCAATCTCAGACATTCACCACCTATTCTGACAATCAGCCTGCAGTAACTATCCAAGTGT 375008 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 |||||||||| || | | || ||||| || || ||||| ||||| |||| || Sbjct 375009 ATGAAGGTGAACGAGCAATGACAAAAGACAACAATCTCCTTGGCACTTTCGATCTGACAG 375068 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | || || ||||| || |||| || ||| |||| || || || || || | || || | Sbjct 375069 GCATACCACCTGCACCGCGAGGCGTGCCTAAAATCGACGTCACATTCGACTTGGACGCCA 375128 Query 476151 ATGGTATTCTTAATGT 476166 | |||||||||||||| Sbjct 375129 ACGGTATTCTTAATGT 375144 >seq135 Length=777160 Score = 188 bits (208), Expect = 5e-42 Identities = 382/559 (68%), Gaps = 11/559 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| |||||| | ||||| || ||| ||||| | || |||||| |||| || Sbjct 630413 GCTATTGGAATTGATCTTGGAACCACATACTCATGTGTGGGAGTGTGGCAACATGGAAAC 630354 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || || |||||||| || |||||||||||||||| ||| | ||||| Sbjct 630353 GTGGAAATTATCGCAAACGACCAAGGCAACCGAACAACACCATCATACGTTGCGTTTACA 630294 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || |||||||||||||| ||||| | || | || | || || |||| Sbjct 630293 GACACAGAGAGACTTATTGGAGATGCCGCTAAGAACCAGGTCGCTTTGAACCCGAATAAT 630234 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || || || || || | || || | || || || || ||| | || Sbjct 630233 ACAGTGTTCGACGCAAAGCGACTAATAGGCAGAAAATTCGACGACCCCAAGATTCAGCAA 630174 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AGAAG 474626 |||||| || |||||||| || || | || | ||| ||| | | || || | Sbjct 630173 GATATGAAACACTGGCCTTTCAAAGTTGTCAACGACTATGGCAAATCTAAAATTCAGGTG 630114 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCA--ATGGTTTT 474684 ||| || | || ||||| |||| |||||| |||||| |||| | || ||||| | Sbjct 630113 GAATTCAAG--GGCGAAACAAAACGATTTTCTCCGGAAGAAAT--CAGCAGCATGGTCCT 630058 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || ||||| |||| || ||| | ||| | || || | || || || | Sbjct 630057 GACGAAGATGAAGGAAACTGCTGAGG-CGTATTTGGGTAGTTCGGTCAGAGACGCTGTTA 629999 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || ||||| || || || || || || || |||||||| || |||||||| | Sbjct 629998 TAACGGTACCAGCTTACTTCAACGACTCCCAGCGCCAAGCAACAAAGGATGCGGGTGCGA 629939 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 |||| ||| | || |||||| | || ||||||||||| || || ||||| | ||||||| Sbjct 629938 TTGCCGGTATCAACGTTTTAAGAATAATTAATGAACCCACCGCTGCCGCTTTGGCTTATG 629879 Query 474864 GTCTTGATAAGAATTCTGA 474882 | || || || || ||||| Sbjct 629878 GCCTGGACAA-AAGTCTGA 629861 Score = 129 bits (142), Expect = 4e-24 Identities = 254/372 (68%), Gaps = 3/372 (1%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 ||||| |||||||| ||||| ||||| ||||| || ||||||||||| ||| || || Sbjct 629336 AATCCCGATGAAGCAGTTGCCTATGGCGCTGCGGTTCAAGCAGCTATCTTAAGTGGGGAA 629277 Query 475853 TCAG-ACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCT 475911 ||| || ||| | | || | | || || || || ||||| | ||||| ||| | Sbjct 629276 -CAGCACAGTAAAATTCAGGATGTACTGCTAGTAGATGTTGCTCCATTGTCATTGGGTAT 629218 Query 475912 TGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAA 475971 ||| || | ||||| | ||||| || | ||||| | ||| | || ||||||| Sbjct 629217 TGAGACTGCAGGAGGAGTAATGACGAAGATCATTGAGCGGAATGCGAAGATTCCATGCAG 629158 Query 475972 AAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTT 476031 | | || || || |||| || || || || ||| || | || |||||||| | | Sbjct 629157 ACAGTCGCAAACCTTCACCACATACTCGGACAACCAACCAGCCGTTACCATCCAGGTGTA 629098 Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091 || ||||| || | |||||||| || || || || ||| ||||| || Sbjct 629097 CGAGGGTGAGCGAGCTATGACTAAAGACAACAATCTGCTCGGGCGATTTGATCTTACTGG 629038 Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151 || ||||| ||||| ||||||| ||| | ||||| ||||| || ||| | ||||| || Sbjct 629037 AATACCTCCAGCTCCACGAGGAGTACCTAAGATTGATGTTACCTTCGATTTGGATGCCAA 628978 Query 476152 TGGTATTCTTAA 476163 ||| | |||||| Sbjct 628977 TGG-AATCTTAA 628967 >seq66 Length=1166317 Score = 183 bits (202), Expect = 2e-40 Identities = 265/364 (73%), Gaps = 10/364 (3%) Strand=Plus/Plus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||||||| | | ||||| ||||| ||||| ||| | || || || |||| ||| Sbjct 407895 GATGCTAAACGTCTCATTGGGCGTAAGTTTGAAGATGCTACAGTTCAGGCTGACATGAAA 407954 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAATACACG 474635 || ||||| ||| |||| || | || |||||| |||||| | || | | ||||||| | Sbjct 407955 CACTGGCCATTTGAGGTTATCAGTGATGGTGGAAAACCAAAGATCAAGGTTCAATACAAG 408014 Query 474636 CAGGTGAA-ACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATG 474694 |||||| || ||||| | ||| || || || | ||||||||| ||| | |||||| Sbjct 408015 --GGTGAAGACAAAACATTCTTC-CCAGAGGAAGTCAGTTCAATGGTATTAACAAAAATG 408071 Query 474695 AAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGA-TGCAGTAATTACTGTTC 474752 || |||| || || | || ||||| ||| | | | || |||||||||||| || | Sbjct 408072 AAGGAAACAGCTGAAGTT-TACCTTGG-CAAAACGGTGCAGAATGCAGTAATTACAGTGC 408129 Query 474753 CAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTC 474812 ||||||| |||||||| || ||| | || || || |||||| | || | ||| | |||| Sbjct 408130 CAGCATACTTTAATGACTCCCAAAGGCAGGCCACAAAAGATTCTGGTACAATCTCTGGTC 408189 Query 474813 TTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATA 474872 | || ||| | || || || |||||||| || || || || |||| ||||||||||| | Sbjct 408190 TGAACGTTCTCCGAATCATCAATGAACCGACTGCTGCTGCGATTGCATATGGTCTTGACA 408249 Query 474873 AGAA 474876 |||| Sbjct 408250 AGAA 408253 Score = 113 bits (124), Expect = 3e-19 Identities = 469/730 (64%), Gaps = 10/730 (1%) Strand=Plus/Plus Query 475493 AGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAA 475552 || || |||||||| || || ||| | ||||||| || | || || ||| ||||| Sbjct 408480 AGGACAGCTTGTGAGCGCGCGAAGAGGACTCTTTCCTCGTCGACACAGGCTAGCATTGAA 408539 Query 475553 GTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAA 475612 | || ||||| ||||| || |||||||| | || || || | || || ||| Sbjct 408540 ATCGACTCTCTGTTTGAGGGTATTGATTACTACACATCCATCACCCGTGCGCGTTTCGAA 408599 Query 475613 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTC-TCAGAGA 475671 || | | | || | |||||| || || || || || || |||| | || | || Sbjct 408600 GAACTGAATGCAGACTTATTTAGATCTACCATGGAGCCAGTAGAG-AAGTCCCTCCGCGA 408658 Query 475672 TTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAAT 475731 | || | ||||| | ||||| || || ||||| || || |||||||| || | || Sbjct 408659 CGCAAAGATGGACAAGGCTCAAGTGCACGACATTGTCCTCGTCGGAGGTTCCACTCGTAT 408718 Query 475732 TCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTG 475790 |||| | | |||| | |||| | | || || || || || | || |||| Sbjct 408719 CCCAAGAGTGC-AGAAGCTCCTTCAAGACTTCTTCAACGGCAAGGAGCTTAAC--AAGTC 408775 Query 475791 TA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGG 475848 | || |||||||| || || || || ||||| || || || || || || || || Sbjct 408776 CATCAACCCTGATGAGGCCGTAGCCTACGGAGCGGCAGTTCAGGCCGCCATCTTGCACGG 408835 Query 475849 TCAATCAGAC-GAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAG 475907 | | | || | || || || | || | | || | ||||| || || || || | | Sbjct 408836 TGA-TAAGTCTGAAGAAGTACAGGATCTCCTCCTGTTGGACGTGACCCCGCTGTCCCTCG 408894 Query 475908 GTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCAT 475967 || | || || | ||| || | ||||| | | ||| | | || || | ||||| Sbjct 408895 GTATCGAGACGGCTGGTGGTGTCATGACCACGTTGATTAAGCGTAACACAACAATCCCCA 408954 Query 475968 GCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAA 476027 ||| || | || |||| | || ||||| || || ||| | ||| || ||| Sbjct 408955 CCAAGCAAACCCAAACATTTACGACCTATTCCGACAACCAACCCGGTGTGCTTATTCAAG 409014 Query 476028 TCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTG 476087 | ||||| ||||| | | || ||| || ||| || || | || | || Sbjct 409015 TATTTGAGGGTGAGCGTGCCATGACCCGAGACAACAACCTTCTCGGTAAATTCGAGCTCA 409074 Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 || ||||| || || || |||| ||||| ||||||||||||||||| || ||||||| Sbjct 409075 CTGGCATTCCCCCAGCGCCACGAGGTGTTCCACAAATTGAAGTTACTTTCGACATTGATG 409134 Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAA 476207 | || ||||| |||||||| | ||| || ||||||| |||||| || || || | Sbjct 409135 CCAACGGTATCCTTAATGTATCGGCTGTCGAGAAATCTACCAACAAGGAGAACAAGATTA 409194 Query 476208 CTATTACAAA 476217 | ||||| || Sbjct 409195 CGATTACCAA 409204 >seq53 Length=2198565 Score = 181 bits (200), Expect = 7e-40 Identities = 350/509 (69%), Gaps = 18/509 (4%) Strand=Plus/Minus Query 297136 TATTGGGGAACACCAATTCCAATTTGGAAATCTGATGATGGTGAAGAAATAATTTGTATT 297195 || ||||| ||||||||||| | |||| ||| |||| ||||| | || ||| || Sbjct 1910780 TACTGGGGTACACCAATTCCCCTCTGGATTTCTAGTGATAAACAAGAAGTTATATGTGTT 1910721 Query 297196 GGTTCACTTGAAGAATTAAAAGAATTTTCAGGAATTGATAATATTAATGATTTACATATT 297255 || ||| || |||| ||| | |||||| || | |||| || ||||||| Sbjct 1910720 GGCAGTATTGCTGAGTTAAGTGAACTAACAGGAAAAGAAA---TTAAAGACTTACATAGG 1910664 Query 297256 GATAAAATTGATCAAATAAAAATTCC---TTCTCGTAAAGGAAAAGGCATGTTATCTCGT 297312 || | |||||||| | ||||||| ||||||| ||| || || | Sbjct 1910663 GAGAGCATTGATCATTTGGAAATTCCCTCTTCTCGTCCAGGTCAACCACCTTTGAAAAGA 1910604 Query 297313 GTTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCAT 297372 ||| | | ||||| || |||||||||||||| ||||||||||| |||| || |||| Sbjct 1910603 GTTTCAGAAGTTTTTGACTGTTGGTTTGAATCGGGTTCTATGCCATATGCCCAGTGTCAT 1910544 Query 297373 TATCCTTTTGAAAATTCCGAAATTTTAGACACTTC--ACAAGATTATATTGCAGATTTTA 297430 ||||| ||||||||| ||| || | ||| | ||| || ||| |||||| Sbjct 1910543 TATCCCTTTGAAAATA---AAA----AGG-AGTTCGAAGAAGTTTTCCCTGCTAATTTTA 1910492 Query 297431 TAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAG 297490 | | ||| ||||||||| || ||||| |||||||| || ||| | || || ||||| | Sbjct 1910491 TTGCTGAAGGAATTGATCAGACTAGAGGGTGGTTTTACACATTAATTGTACTGTCTACTG 1910432 Query 297491 CTATATTTAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTG 297550 | |||| || |||||| |||||||||| | |||| | || | || ||| ||| Sbjct 1910431 CACTATTCAATAAACCACCATTTAAAAACTTGATTGCAAATGGCTTAATTCTCGCTTCTG 1910372 Query 297551 ATGGACAAAAAATGTCAAAAAGTAAAGGTAATTATCCTGATCCAAAT-ATTTTGATGGAT 297609 |||| ||||||||||| || |||| ||||||||||| || | || | | | || Sbjct 1910371 ATGGGCAAAAAATGTCTAAGCGTAAGAAGAATTATCCTGACCCTCTTGATGTCGTTAGA- 1910313 Query 297610 AAATATGGTGCAGATACTTTACGTCTTTA 297638 ||||||||||| ||| | ||| | ||||| Sbjct 1910312 AAATATGGTGCGGATGCATTAAGGCTTTA 1910284 Score = 140 bits (154), Expect = 2e-27 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| | |||||||||||||| ||| || || || || || | || || | | Sbjct 1830975 AGACGTAACACAAGATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTGCGG 1830916 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 |||||| | |||||||||||||| || |||||||| || || || ||||| |||||| Sbjct 1830915 CCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGCTGGTCTGGTGGAATACCTTCC 1830856 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734 ||||||||||| || ||||||| |||||| || |||| | | ||| ||||| Sbjct 1830855 TTGTCTTGAATTTTAGCTTTGACATTTTCAATGGTGTCAGAGGCTTCCACTTCTAGGGTG 1830796 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || ||||| || |||||||||||||| Sbjct 1830795 ATGGTTTTGCCTGTGAGTGTTTTAACGAAAATTTG 1830761 Score = 125 bits (138), Expect = 5e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATG-AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCT 480613 ||||||||||||||||| ||| | || |||| ||| || || || | || |||| Sbjct 1831203 AGACGGAGTACAAGATGCAAGGTTGATTCCTTTTGAATG-TTGTAGTCTGACAGCGTTCG 1831145 Query 480614 GTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTC 480673 | |||||| | |||||||||||| || ||||||||||| || ||||| ||||| ||||| Sbjct 1831144 GCCATCTTCCAATTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGTGGAATACCTTC 1831085 Query 480674 CTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGT 480733 ||||||||| || || ||| ||| |||||| || || | || | || | || Sbjct 1831084 CTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTGTCTGAAGGTTCAACCTCCAATGT 1831025 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || || || ||||| |||||||| Sbjct 1831024 GATGGTTTTTCCTGTCAGTGTTTTAACAAAAATTTG 1830989 Score = 102 bits (112), Expect = 5e-16 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAGTTC 480612 ||||| | |||||||||||||| ||| |||| ||| || || || | || || | Sbjct 1830747 AGACGTAACACAAGATGAAGTGTTGACTC-CTTTTGAATG-TTGTAGTCTGAAAGGGTGC 1830690 Query 480613 TGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTT 480672 | |||||| | |||||||||||||| || |||||||| || || || ||||| |||| Sbjct 1830689 GGCCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGCTGGTCTGGTGGAATACCTT 1830630 Query 480673 CCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGG 480732 ||||||| || || || ||| ||| |||||| || || | || | ||| | | Sbjct 1830629 CCTTGTCCTGGATTTTAGCTTTAACATTTTCAATGGTGTCTGAAGGTTCAACTTCTAATG 1830570 Query 480733 TAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || || ||||| || ||||| || || Sbjct 1830569 TGATGGTTTTTCCCGTAAGAGTTTTTACGAAGATCTG 1830533 >seq92 Length=1326259 Score = 132 bits (146), Expect = 3e-25 Identities = 354/527 (67%), Gaps = 23/527 (4%) Strand=Plus/Plus Query 474363 GTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAA 474422 |||| | ||||| | ||||||| ||| || || || ||||| ||||| ||||| | | Sbjct 161523 GTGTTGGTGTTTACAAGAATGGTAGAGTTGAGATTATAGCCAACGACCAGGGTAACCGTA 161582 Query 474423 CAACACCATCATATGTTTCTTTTACTG---AAACTGAACATCTTATTGGAGATGCTGCTA 474479 || ||||||||||| | || |||| | ||||| ||||||||||||||| || | Sbjct 161583 TCACTCCATCATATGTAGCCTTCACTGCTGATGGTGAACGTCTTATTGGAGATGCCGC-A 161641 Query 474480 AATATCAAGCTGCAT-CTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGT 474538 || | | |||| | | ||||||| || || | ||||||||||| | | |||||| Sbjct 161642 AAGAACCAGCTCACTACAAATCCTGAAAACACAGTATTTGATGCTAAGCGTCTTATTGGT 161701 Query 474539 CGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCAT----TGGCCTTTTAAGGT 474594 ||| | | || ||||||||||| |||| |||| | || || ||||| Sbjct 161702 CGTGAATGGACAGACTCCACTGTCCAACATGAT----GTCAAATTCTTCCCCTTCAAGGT 161757 Query 474595 GATAAATGTTGGTGGTAAACCATATATAGAAGC-AATACA-CGCAGGTGAAACTAAACAA 474652 | | ||||| || | | | || || | || | || || || Sbjct 161758 AGTTGAGAAGAACACCAAACCTCATGTGGCTGTGAAAACTGCCCAAG-GAGAC-AAGGTG 161815 Query 474653 TTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG--AGCT 474710 ||| |||| ||| |||| || | ||||| | | || ||||| |||| || |||| Sbjct 161816 TTTGCACCTGAAGAAATCTCAGCTATGGTGCTGACTAAGATGAAGGAAACTGCTGAAGCT 161875 Query 474711 CATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGAT 474769 |||||||| ||||||| | || | || || | ||||| || || || || || || Sbjct 161876 --TATCTTGG-CAAGAAGGTTACCCACGCTGTCGTAACTGTACCCGCCTACTTCAACGAC 161932 Query 474770 TCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATT 474829 ||||||||||||| ||||||||||| ||| |||||| || || || || | | || Sbjct 161933 GCTCAACGTCAAGCGACTAAAGATGCTGGAGTAATTGCTGGCCTCAACGTCATGAGAATA 161992 Query 474830 ATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 ||||| || || || || || ||| |||| || ||||| || ||||| Sbjct 161993 ATTAACGAGCCTACCGCTGCTGCAATTGCCTACGGTCTCGACAAGAA 162039 >seq229 Length=252579 Score = 116 bits (128), Expect = 2e-20 Identities = 169/235 (72%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 ||||| ||||| ||||| ||||||||||| || || ||||| || ||| | | ||| | Sbjct 11932 AATCCCGATGAGGCTGTGGCATATGGAGCAGCGGTTCAAGCGGCAATTCTCACCGGTTCA 11873 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 |||||| || | || || |||| || || ||||| ||| | ||||||||| | Sbjct 11872 AAAGACGAACGGCTTCAAGATGTTTTACTGGTAGATGTAACACCATTGTCATTAGGTATA 11813 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCC-AT-GCA 475970 ||||||| ||||| | |||||||| || | || || ||||| ||||| || ||| Sbjct 11812 GAAACAGCCGGAGGAGTAATGACTAAACTGGTCGAAAGGAATACGAGAATCCCTATAGCA 11753 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCA 476025 | || ||| || ||||| |||||| ||||||| ||| | | ||||| || || Sbjct 11752 CAGAA--AAAGGTTTTTTCAACTTATGCTGATAACCAACCGGCCGTAACAATACA 11700 Score = 109 bits (120), Expect = 4e-18 Identities = 118/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || |||||||| ||| | || || || | | ||||||| || | ||||||||||| Sbjct 13170 GCTATTGGTATAGATCTCGGTACAACATTCTCCTGTGTAGGAGTATTTCAAAATGGTAAG 13111 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || ||||| ||||| |||||| || || |||||||| | |||||| Sbjct 13110 GTTGAAATTATCGCAAATGAACAAGGAAATAGAGTTACCCCTTCATATGTCGCCTTTACT 13051 Query 474449 GAAACTGA-ACATCTTATTGGAGATGCTGCTAAA 474481 |||||||| | || ||||||| ||||| |||||| Sbjct 13050 GAAACTGAGAGAT-TTATTGGTGATGCAGCTAAA 13018 Score = 96.9 bits (106), Expect = 2e-14 Identities = 159/228 (70%), Gaps = 11/228 (5%) Strand=Plus/Plus Query 290735 ATATT--CATTAATGAAATATCTAATGTTCCTGCACCAAAATCGTATATAATAACATTAC 290792 ||||| || || ||||| ||| |||||||| | |||| ||| |||||| || || Sbjct 12461 ATATTTGCAGTATTGAAACATCGAATGTTCCCCCGCCAAGATCAAATATAAGTACGTT-- 12518 Query 290793 CTCCATTTTTATTTGTCCAAGTTTTGCTTCCAAGACCATATGTTAATGAAGCTGCTGTTG 290852 |||| | | ||| ||| || | ||||||| | |||| |||||| |||| Sbjct 12519 ------TTTTTCTCCACTAAGATTTTTATCTA-GACCATACGCCAATGCAGCTGCCGTTG 12571 Query 290853 GTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCCT 290912 |||| ||||| ||||||| ||||| | | | ||||| | | | |||| || || | Sbjct 12572 GTTCGTTTATTATTCTTAGTACATTTATAGCAGCAATCGTCCCAGCATCTTTCGTAGCTT 12631 Query 290913 GGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCTTTTT 290960 | ||||| | |||||||| |||||||||||||| | || || |||| Sbjct 12632 GTCGTTGAGAGTCATTAAAGTAAGCAGGGACTGTTACGACGGCATTTT 12679 >seq245 Length=302172 Score = 96.9 bits (106), Expect = 2e-14 Identities = 385/596 (65%), Gaps = 10/596 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| | |||||||| |||||||||||||| ||||| || || ||| ||||| || Sbjct 62238 GCAGTGGGTATTGACTTAGGAACTACTTATTCGTGTGTGGCAGTGTGGGAAAATAACAAT 62297 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || | |||| ||||| ||||| ||| ||||||||||||||| ||| | || || Sbjct 62298 GTGAAAGTGATTGTAAATGAACAAGGCAATCGAACAACACCATCATTCGTTGCGTTCACA 62357 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 | || | | | || || | || || ||| | || || || ||||| || Sbjct 62358 CATCGCGAGCGTGTAATCGGCCAAGCGGCGAAAAACCAGGCCGCTGTCAATCCAAAAAAC 62417 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || ||| || |||||| | | || || |||| | |||||| | | ||| Sbjct 62418 ACAGTTTCTGCCGCTAAACGCCTCATCGGACGTAGATACGATGATGTGGGTCTTCAAATG 62477 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC- 474627 || | || || | || || || ||||| || | |||||| ||| | || || Sbjct 62478 GACCTACGGCACTACCCCTTCAAAGTGATCAACGAAAATGGTAAGCCAAAGATCCTAGTC 62537 Query 474628 -AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | || | | || | | |||||||| ||| ||||| ||| ||| | | Sbjct 62538 GAGTATAAG--GGCAAGATGCGGTCGTTTTCACCCGAAGAAATTAGTTCTATGATACTTT 62595 Query 474687 CCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAAT 474744 || ||||| | || ||| | ||| | || |||| || | | || || || Sbjct 62596 TCAGGATGAAGGAGGTTGCCGAGG-CGTATTTAGGT-AAGACTGTCGATAAGGCCGTGAT 62653 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||||| ||||| ||||||| ||| ||||||| || || |||| | || || || || Sbjct 62654 AACTGTGCCAGCTTATTTTACAGATGCTCAACGGCAGGCGACTAGATTGGCTGGGAGTAT 62713 Query 474805 TGCAGGTCTTA-ATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 ||| || |||| | ||| | | || ||||||||||| || || ||||| || || | || Sbjct 62714 TGCTGG-CTTAGAAGTTATTAGAATAATTAATGAACCGACCGCCGCCGCGCTCGCGTTTG 62772 Query 474864 GTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 || ||||||||| | | | ||| ||| ||||| || | |||| || ||| Sbjct 62773 GTTATGATAAGAAATTTAGCGGTGAACGAAACGTTTTGATTTACGATTTAGGTGGT 62828 >seq16 Length=1182747 Score = 95.1 bits (104), Expect = 8e-14 Identities = 222/327 (68%), Gaps = 15/327 (5%) Strand=Plus/Plus Query 356241 AGGCCAAAAACGATGAATTAAATTCATTATTAATCCTTTAATATGATATCCATCAACGTC 356300 ||||||| |||| || ||||| || || || ||||| ||||| |||||||| || Sbjct 653488 AGGCCAATTGTGATGTATGAAATTTATGATCAAACCTTTTATATGCGATCCATCATGATC 653547 Query 356301 TTGATCTGCTAAAATCATAATACTACCATACCTAAGTT-CTTTAAGATCAT-TATA---- 356354 ||||| || | ||||| | | ||||| | ||| |||||| ||| | ||| Sbjct 653548 CTGATCGGCCATTATCATCACTTTGCCATAACGGAGTGACTTTAA-ATCGTCTATTGTGT 653606 Query 356355 --TACTTTTCCTTGCTCTAAA--CCAACAAttttttttATAGCAGTTATTTCTTCATTAC 356410 ||||| | ||| || || |||| |||||| ||| | | | || || |||| | Sbjct 653607 TGTACTTCTTTTTGTACTGAAGCCCAAGGATTTTTATTAGATTATTAATCTCCACATT-C 653665 Query 356411 TTGCGACAATTGCTGGACTTTTGGTTCTT--ACATTTAGTGGTTTTCCTTTTAATGGGAA 356468 | | || | || | | | ||| ||||||| ||||| || || |||||||| Sbjct 653666 TCGAGA-ACCTGTTTATGTGAAGCATCTCGGACATTTAAAGGTTTACCCTTCAATGGGAA 653724 Query 356469 AATACCATAATAATCTCTTCCGACAACATTTAATCCAGACATAGCAAATGCTTTAGCTGA 356528 | ||||| | || || ||||||||| | || || || | ||| || | ||||||||| Sbjct 653725 CACCCCATAGTGGTCCCTCCCGACAACACTCAACCCCGATACAGCTAAAGTTTTAGCTGA 653784 Query 356529 ATCTCCTTCAGTAAGAATTAAAGTACA 356555 ||||| || ||||| ||||||||||| Sbjct 653785 GTCTCCCTCGGTAAGGATTAAAGTACA 653811 >seq80 Length=393969 Score = 86.0 bits (94), Expect = 4e-11 Identities = 89/116 (77%), Gaps = 3/116 (3%) Strand=Plus/Plus Query 737240 ATGATCCATTAAATTTTGTCCAACACCAGGTAAATTTCTTACAACAGGAATACCAAGATC 737299 ||| ||||||||||| | ||||| ||||||||| | | ||||| ||||| ||| Sbjct 340026 ATGGTCCATTAAATTGTATCCAA---CAGGTAAATCTTTAACAACGGGAATTTTAAGGGA 340082 Query 737300 TTTTAAATGTTCTTCTGGACCTAAACCTGATAACATTAATATTTGAGGTGTATTAA 737355 || |||||| |||| ||| |||| ||| |||||||| || | ||| |||| ||||| Sbjct 340083 TTCTAAATGGTCTTTTGGCCCTATACCAGATAACATCAAGAGTTGGGGTGAATTAA 340138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267864008627504