Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pieris_20rapae_20[genbank_20GCA_5F001856805.1_202016-10-16] 7,348 sequences; 245,871,251 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq246 89.7 9e-13 >seq246 Length=440471 Score = 89.7 bits (98), Expect = 9e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 183007 GAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATG 183066 ||||| |||||| | |||||||| | || |||||||| | | ||||||||||| || Sbjct 389620 GAAACGCATGACGATTTATGGAATTCGTCTCAAATACAATTAGTTAGAGAAGGAAAGTTG 389679 Query 183067 CATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAA 183126 || | || | ||||||||||||||||| ||||| || || ||||| || || ||| Sbjct 389680 CACGGCTTCCTTCGAATGTACTGGGCTAAGAAGATTCTAGAGTGGACTTCAAGCCCCGAA 389739 Query 183127 GATGCTTTGAGTTATAGTATCTATATGAA 183155 || || ||| || || |||||||| Sbjct 389740 GAAGCCCTGAAGTACGCCATATATATGAA 389768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903328221681280